Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 12 Aligned Residues 330 % Identity 40% Template c2b4rQ_ PDB info PDB header:oxidoreductase Chain: Q: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 plasmodium falciparum at 2.25 angstrom resolution reveals intriguing3 extra electron density in the active site Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	.	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E
Query Conservation																																							.
Alig confidence																											.	.	.										.
Template Conservation																											.	.	.
Template Sequence		A	T	K	L	G	I	N	G	F	G	R	I	G	R	L	V	F	R	A	A	F	G	R	K	D	.	.	.	I	E	V	V	A	I	N	D	P	F	M	D	L	N	H	L	C	Y	L	L	K	Y	D	S	V	H	G	Q	F	P	C	E	V	T	H	A	D	G	F	L	L	I	G	E	K	K	V	S	V	F	A	E
Template Known Secondary structure											S														S	S	.	.	.									S	S	S													T	T	T		S		S	S						T	T					T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		K	D	P	S	Q	I	P	W	G	K	C	Q	V	D	V	V	C	E	S	T	G	V	F	L	T	K	E	L	A	S	S	H	L	K	G	G	A	K	K	V	I	M	S	A	P	P	K	D	D	.	T	P	I	Y	V	M	G	I	N	H	H	Q	Y	D	T	K	Q	L	I	V	S	N	A	S	C	T	T	N	C	L
Template Known Secondary structure		S		T	T	S	S		T	T	T	T	T		S						S	S	S			S					T					T	T		S					S	S			S	S		.			B			T	T	T	T	G	G	G			T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	I	D	A	Y	H	.	.	.	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.
Template Conservation
Template Sequence		A	P	L	A	K	V	I	N	D	R	F	G	I	V	E	G	L	M	T	T	V	H	A	S	T	A	N	Q	L	V	V	D	G	P	S	K	G	G	K	D	W	R	A	G	R	C	A	L	S	N	I	I	P	A	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	V	A	F	R	V
Template Known Secondary structure												T															T	T	S		S	S	S				G	G	G			G	G	G	G	S		T	T	T								S	T	T	T	T					S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	I	N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P	H	S	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K	T	L	V	W	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	G	T	V	S	V	V	D	L	V	C	R	L	Q	K	P	A	K	Y	E	E	V	A	L	E	I	K	K	A	A	E	G	P	L	K	G	I	L	G	Y	T	E	D	E	V	V	S	Q	D	F	V	H	D	N	R	S	S	I	F	D	M	K	A	G	L	A	L	N	D	N	F	F	K	L	V	S	W	Y	D
Template Known Secondary structure		S		S	S											S	S																	T	T	T	B	T	T						S				G	G	G	G	T	T				S											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	W	G	F	A	N	R	M	L	D	T	T	L	A	M	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	W	G	Y	S	N	R	V	L	D	L	A	V	H	I	T	T
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions