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Job DescriptionP0A9B6
Confidence100.00%DateThu Jan 5 11:09:49 GMT 2012
Rank62Aligned Residues312
% Identity17%Templatec1ys4A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: structure of aspartate-semialdehyde dehydrogenase from2 methanococcus jannaschii
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10 .........20.........30.........40.........50.........60 .........70.........80
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Query Sequence  VRVAINGF. GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWE. VRQERDQLFVGDDAIRVLHE
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Template Sequence  IKVGVLGATGSVGQRFVQLLADH. . . PXFELTAL. . . . . . . . . . . . AASERSAGKKYKDACYWFQDRDIPENIKDXVVIP
Template Known Secondary structure  TTTSTT
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Query Sequence  RSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSH. PGSNDLDATVVYGVNQDQL. . . . . . . . . . RAEHRI
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Template Sequence  TDPKHEEFE. . DVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRXEEDVPLVIPEVNADHLELIEIQREKRGWDGAI
Template Known Secondary structure  S
TTSGGGT..T




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   74.....80.. .......90.........100.........110.........120.........130.........140.........150.
 
   150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  VSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAA. . . . . . . . . . . .
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Template Sequence  ITNPNCSTICAVITLKPIXDKFGLEAVFIATXQAVS. . . . . . . GAGYNGVPSXAILDNLIPFIKNEEEKXQTESLKLLGT
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   152.......160.........170.........180....... ..190.........200.........210.........220....
 
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Query Sequence  GITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSA. .
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Template Sequence  LKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVXDKFDPLKDLNLPTYAKPIVIREEIDRPQPRLDR
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
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Query Sequence  . . . . . . IVDGTQTRVSGAHLIKTLVWCDN. EWGFANRMLDTTLAMATVAF
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Template Sequence  NEGNGXSIVVGRIRKDPIFDVKYTALEHNTIRGAAGASVLNAEYFVKKYI
Template Known Secondary structure  TGGGGTS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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