Job Description P0A9B6 Confidence 95.49% Date Thu Jan 5 11:09:49 GMT 2012 Rank 217 Aligned Residues 143 % Identity 19% Template c1lldA_ PDB info PDB header:oxidoreductase(choh (d)-nad (a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: molecular basis of allosteric activation of bacterial l-lactate2 dehydrogenase Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R
Query Conservation
Alig confidence																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	K	L	A	V	I	G	A	G	A	V	G	S	T	L	A	F	A	A	A	Q	R	G	I	A	R	E	I	V	L	E	D	I	A	K	.	.	.	.	.	E	R	V	E	A	E	V	L	D	M	Q	H	G	S	S	F	Y	P	T	V	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	S	D
Template Known Secondary structure											S													T	T			S							S	S		.	.	.	.	.													T	G	G	G	S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.														.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	H	G	E	A	H	I	A	A	G	.	.	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence								.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.										.	.	.	.	.
Template Conservation								.	.	.	.																																																					.	.	.	.	.
Template Sequence		D	P	E	I	C	R	.	.	.	.	D	A	D	M	V	V	I	T	A	G	P	R	Q	K	P	G	Q	S	R	L	E	L	V	G	A	T	V	N	I	L	K	A	I	M	P	N	L	V	K	V	A	P	N	A	I	Y	M	L	I	T	N	P	.	.	.	.	.	V	D	I	A	T	H	V	A	Q	K	L	T	G
Template Known Secondary structure			G	G	G	G	T	.	.	.	.	T		S												T	T																										T	T	S							S	S	.	.	.	.	.													T
Template Predicted Secondary structure								.	.	.	.																																																					.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I	I	P	V	I	K	L	L	D	D	A	Y	G	I
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		L	P	E	N	Q	I	F	.	.	G	S	G	T	N	L	D	S	A	R	L	R	F	L	I	A	Q	Q	T	G	V
Template Known Secondary structure				T	T	S			.	.			T	T																T
Template Predicted Secondary structure									.	.
Template SS confidence
		140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions