Job Description P0A9B6 Confidence 93.13% Date Thu Jan 5 11:09:49 GMT 2012 Rank 319 Aligned Residues 98 % Identity 28% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R	S	L
Query Conservation
Alig confidence																																				.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	V	V	I	G	A	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	G	I	A	D	E	I	V	L	I	D	A	N	E	.	.	.	.	.	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	D	I	W	D	Y	D	D	C
Template Known Secondary structure									S												T	T	T			S							S	S		.	.	.	.	.														G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.													.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.												.	.
Query SS confidence																								.	.	.	.	.	.	.	.												.	.
Query Sequence		Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	.	.	.	.	.	.	.	.	R	E	H	G	E	A	H	I	A	A	G	.	.	A	K	K	V	L	F	S	H	P
Query Conservation																								.	.	.	.	.	.	.	.												.	.
Alig confidence			.	.	.	.	.	.	.															.	.	.	.	.	.	.	.												.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	D	A	D	L	V	V	I	C	A	G	A	N	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T	N	P
Template Known Secondary structure		S	.	.	.	.	.	.	.	S		S																													T	T			S							S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		87								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions