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Job DescriptionP0A9B6
Confidence100.00%DateThu Jan 5 11:09:49 GMT 2012
Rank4Aligned Residues334
% Identity39%Templatec1i32D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: leishmania mexicana glyceraldehyde-3-phosphate2 dehydrogenase in complex with inhibitors
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TVRVAINGFGRIGRNVVRALYESGR. RAEITVVAINELA. DAAGMAHLLKYDTSHGRFAWEVRQERDQ. . . . . . . . LFVG
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Template Sequence  PIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVN
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STT
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Query Sequence  DDAIR. VLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRA. EHRI
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Template Sequence  GHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGA. KTIVMGVNQHEYSPASHHV
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SSGGGS
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   82.......90.........100.........110.........120.........130.........140. ........150.........160
 
   150.........160....... ..170.........180.........190..... ....200.........210.........220.......
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Query Sequence  VSNASCTTNCIIPVIKLL. DDAYGIESGTVTTIHSAMHDQQVIDAYH. PDLRRTRAASQSIIPVDTKLAAGITRFFPQFN
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Template Sequence  VSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTK
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   228.230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  DRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSG.
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Template Sequence  GKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNL
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   307..310.........320.........330......
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Query Sequence  . . . AHLIKTLVWCDNEWGFANRMLDTTLAMATV
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Template Sequence  PGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAK
Template Known Secondary structure  TT
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   321........330.........340.........350...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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