Job Description P0A9B6 Confidence 100.00% Date Thu Jan 5 11:09:49 GMT 2012 Rank 24 Aligned Residues 308 % Identity 15% Template c1b7gO_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:protein (glyceraldehyde 3-phosphate dehydrogenase); PDBTitle: glyceraldehyde 3-phosphate dehydrogenase Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		T	V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	.	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E
Query Conservation																																																														.
Alig confidence																									.	.	.																																			.
Template Conservation																									.	.	.
Template Sequence		M	V	N	V	A	V	N	G	Y	G	T	I	G	K	R	V	A	D	A	I	I	K	Q	.	.	.	P	D	M	K	L	V	G	V	A	K	T	S	P	N	Y	E	A	F	I	A	H	R	R	G	I	R	I	Y	V	P	Q	Q	S	I	K	K	F	E	E	S	G	I	P	V	A	G	T	V	E	D	L	I	K	T
Template Known Secondary structure											S												T		.	.	.	T	T									S	S		S									T	T							G	G	G						T	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	E	H	G	E	A	H	I	A	A	G	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R	A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	D	I	V	V	D	T	T	P	N	G	V	G	A	Q	Y	K	P	I	Y	L	Q	L	Q	R	N	A	I	F	Q	G	G	E	K	A	E	V	A	D	I	S	F	S	A	L	C	N	Y	N	E	A	L	.	G	K	K	Y	I	R	V	V	S	C	N	T	T	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		S							S	T	T												T	T							T	T	S		G	G	G	S	S													T	.	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence
														78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	I	K	L	L	D	D	A	Y	G	I	E	S	G	T	V	T	T	I	H	S	A	M	H	D	Q	Q	V	I	D	A	Y	H	P	D	L	R	R	T	R	A	A	S	Q	S	I	I	P	V	D	T	K	L	A	A	G	I	T	R	F	F	P	Q	F	N	D	R	F	E	A	I	A	V	R	V	P	T	I
Query Conservation
Alig confidence																																					.	.	.	.																.	.											.	.
Template Conservation																																					.	.	.	.																.	.											.	.
Template Sequence		L	R	T	I	C	T	V	N	K	V	S	K	V	E	K	V	R	A	T	I	V	R	R	A	A	D	Q	K	E	V	K	K	G	P	I	.	.	.	.	N	S	L	V	P	D	P	A	T	V	P	S	H	H	A	.	.	K	D	V	N	S	V	I	R	N	L	.	.	D	I	A	T	M	A	V	I	A	P	T	T
Template Known Secondary structure										T	T	S													S	S		T	T			S				S	.	.	.	.	S					S	S	S	S	S	S		T			.	.					T	T	S	T	T		.	.										S		S
Template Predicted Secondary structure																																					.	.	.	.																.	.											.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																.	.	.	.																									.	.	.	.	.
Query SS confidence																																.	.	.	.																									.	.	.	.	.
Query Sequence		N	V	T	A	I	D	L	S	V	T	V	K	K	P	V	K	A	N	E	V	N	L	L	L	Q	K	A	A	Q	G	.	.	.	.	A	F	H	G	I	V	D	Y	T	E	L	P	L	V	S	V	D	F	N	H	D	P	H	S	.	.	.	.	.	A	I	V	D	G	T	Q	T	R	V	S	G	A	H	L	I	K
Query Conservation																																.	.	.	.																									.	.	.	.	.
Alig confidence																																.	.	.	.																		.							.	.	.	.	.			.								.
Template Conservation																																																					.														.								.
Template Sequence		L	M	H	M	H	F	I	N	I	T	L	K	D	K	V	E	K	K	D	I	L	S	V	L	E	N	T	P	R	I	V	L	I	S	S	K	Y	D	A	E	A	T	A	E	L	V	E	V	A	R	D	.	L	K	R	D	R	N	D	I	P	E	V	M	I	.	F	S	D	S	I	Y	V	.	K	D	D	E	V	M
Template Known Secondary structure		S											S	S													T		T	T						S	S	S	S			S											.	T	T		G	G	G				S				.		G	G	G				.		T	T
Template Predicted Secondary structure																																																					.														.								.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.		.	.	290	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	W	C	D	N	E	W	G	F	A	N	R	M	L	D	T	T	L	A	M	A	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	Y	A	V	H	Q	E	S	I	V	V	P	E	N	I	D	A	I	R	A	S	M	K	L
Template Known Secondary structure								T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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