Job Description P0A9B6 Confidence 95.27% Date Thu Jan 5 11:09:49 GMT 2012 Rank 224 Aligned Residues 142 % Identity 21% Template c1a5zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: lactate dehydrogenase from thermotoga maritima (tmldh) Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	A	I	N	G	F	G	R	I	G	R	N	V	V	R	A	L	Y	E	S	G	R	R	A	E	I	T	V	V	A	I	N	E	L	A	D	A	A	G	M	A	H	L	L	K	Y	D	T	S	H	G	R	F	A	W	E	V	R	Q	E	R	D	Q	L	F	V	G	D	D	A	I	R	V	L	H	E	R	S
Query Conservation
Alig confidence																																					.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	G	I	V	G	L	G	R	V	G	S	S	T	A	F	A	L	L	M	K	G	F	A	R	E	M	V	L	I	D	V	D	K	.	.	.	.	.	K	R	A	E	G	D	A	L	D	L	I	H	G	T	P	F	T	R	R	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	A	G	D
Template Known Secondary structure										S														T			S							S	S		.	.	.	.	.														G	G	G	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		L	Q	S	L	P	W	R	E	L	G	V	D	V	V	L	D	C	T	G	V	Y	G	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	G	E	A	H	I	A	A	G	.	.	A	K	K	V	L	F	S	H	P	G	S	N	D	L	D	A	T	V	V	Y	G	V	N	Q	D	Q	L	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence							.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.										.	.	.	.	.
Template Conservation							.	.	.	.																																																					.	.	.	.	.
Template Sequence		Y	A	D	L	K	.	.	.	.	G	S	D	V	V	I	V	A	A	G	V	P	Q	K	P	G	E	T	R	L	Q	L	L	G	R	N	A	R	V	M	K	E	I	A	R	N	V	S	K	Y	A	P	D	S	I	V	I	V	V	T	N	P	.	.	.	.	.	V	D	V	L	T	Y	F	F	L	K	E	S	G	M
Template Known Secondary structure		G	G	G	G	T	.	.	.	.	T		S												S	S																										T	T							S	S	S	.	.	.	.	.													T
Template Predicted Secondary structure							.	.	.	.																																																					.	.	.	.	.
Template SS confidence
		85	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	H	R	I	V	S	N	A	S	C	T	T	N	C	I	I	P	V	I	K	L	L	D	D	A	Y	G	I	E
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		D	P	R	K	V	F	.	.	G	S	G	T	V	L	D	T	A	R	L	R	T	L	I	A	Q	H	C	G	F	S
Template Known Secondary structure			T	T	T			.	.			T	T																T
Template Predicted Secondary structure								.	.
Template SS confidence
		156	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions