Job Description P69434 Confidence 23.38% Date Thu Jan 5 12:11:38 GMT 2012 Rank 179 Aligned Residues 156 % Identity 12% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

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		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	P	D	S	G	K	H	D	V	D	L	T	T	I	V	Y	S	P	P	L	K	D	N	W	R	G	F	A	G	F	G	Y	A	D	G	Q	F	S	E	G	K	G	I	V	R	D	W	L	A	G	V	E	W	R	S	R	N	I	W	L	E	A	E	Y	A	E	R	V	F	N	H	E	H	K	P	G	A	R
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		Y	N	S	K	Y	D	A	S	G	A	L	D	N	Y	N	G	I	A	V	T	Y	S	I	S	G	V	N	L	Y	L	S	Y	V	.	D	P	D	Q	T	V	D	S	S	L	V	T	E	E	F	G	I	A	A	D	W	S	N	D	M	I	S	L	A	A	A	Y	T	T	D	A	G	G	I	V	D	N	D	I	A	F
Template Known Secondary structure					S			T	T	S	T	T	T	T											S	S									.		T	T	T	T	S		G	G	G	S													S	S										S	G	G	G		T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	W	Y	D	F	N	D	N	W	R	I	G	S	Q	L	E	R	L	S	H	R	V	P	L	R	A	M	K	N	G	V	T	G	N	S	A	Q	A	Y	V	R	W	Y	Q	N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	S	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																			.	.	.																													.
Template Conservation																							.	.	.	.	.	.	.	.	.																			.	.	.																													.
Template Sequence		V	G	A	A	Y	K	F	N	D	A	G	T	V	G	L	N	W	Y	D	N	G	.	.	.	.	.	.	.	.	.	L	S	T	A	G	D	Q	V	T	L	Y	G	N	Y	A	F	G	A	.	.	.	T	T	V	R	A	Y	V	S	D	I	D	R	A	G	A	D	T	A	Y	G	I	G	A	D	Y	Q	F	A	.
Template Known Secondary structure									S	S	S											T	.	.	.	.	.	.	.	.	.	T	S	T	T		S											T	T	.	.	.												S	T	T															.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																			.	.	.																													.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	Y	L	I	V	D	F	L	P	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	G	V	K	V	S	G	S	V	Q
Template Known Secondary structure		.	T	T
Template Predicted Secondary structure		.
Template SS confidence
			263	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions