Job Description P69434 Confidence 96.36% Date Thu Jan 5 12:11:38 GMT 2012 Rank 121 Aligned Residues 145 % Identity 13% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.											.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	.	.	.	.	.	.	.	.	.	.	S	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P	S	L	Y	Y	E	Q	N	T	E	H	D	T	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																.	.																						.	.	.
Template Conservation																																												.	.																						.	.	.
Template Sequence		D	N	T	W	Y	T	G	A	K	L	G	F	S	Q	Y	H	D	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	.	.	N	P	Y	V	G	F	E	M	G	Y	D	F	L	G	R	M	P	Y	K	G	S	.	.	.	V	E	N	G	A	Y	K	A	Q	G	V	Q
Template Known Secondary structure																		S	S	S			B	S	S					S	S													.	.	T	T	T												S		T	T		S	S	.	.	.				S
Template Predicted Secondary structure																																												.	.																						.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.									.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.					.	.	790	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																																		.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.																																		.	.	.	.
Query Sequence		F	E	A	S	H	L	L	W	R	S	Y	E	N	S	W	E	Q	I	F	S	A	G	V	G	A	S	W	Q	K	.	.	.	.	.	.	.	.	H	Y	G	T	D	V	V	T	Q	L	G	Y	G	Q	R	I	S	W	N	D	V	I	D	A	G	A	T	L	R	W	E	K	R	.	.	.	.	P	Y	D	G	D	R
Query Conservation																															.	.	.	.	.	.	.	.																																		.	.	.	.
Alig confidence											.	.																			.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation											.	.
Template Sequence		L	T	A	K	L	G	Y	P	I	.	.	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	F	T	N	N	I	G	D	A	H	T	I	G	T	R
Template Known Secondary structure										S	.	.	S	S	S																		S	B	T	T	B																					T	T																B	T	T	T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		794	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	N	L	Y	V	E	F	D	M	T	F	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions