Job Description P69434 Confidence 99.72% Date Thu Jan 5 12:11:38 GMT 2012 Rank 30 Aligned Residues 328 % Identity 12% Template c3sf4B_ PDB info PDB header:signaling protein/protein binding Chain: B: PDB Molecule:g-protein-signaling modulator 2; PDBTitle: crystal structure of the complex between the conserved cell polarity2 proteins inscuteable and lgn Resolution 2.60 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		Y	A	A	V	A	V	A	Y	R	N	L	Q	Q	W	Q	N	S	L	T	L	W	Q	K	A	L	S	L	E	P	Q	N	K	.	.	.	.	D	Y	Q	R	G	Q	I	L	T	L	A	D	A	G	H	Y	D	T	A	L	V	K	L	K	Q	L	N	S	G	A	P	D	K	A	N	L	L	A	E	A	Y	I	Y	K
Query Conservation																																		.	.	.	.
Alig confidence																																		.	.	.	.
Template Conservation
Template Sequence		L	A	L	E	G	E	R	L	C	K	S	G	D	C	R	A	G	V	S	F	F	E	A	A	V	Q	V	G	T	E	D	L	K	T	L	S	A	I	Y	S	Q	L	G	N	A	Y	F	Y	L	H	D	Y	A	K	A	L	E	Y	H	H	H	D	L	T	L	A	R	T	I	G	D	Q	L	G	E	A	K	A	S	G
Template Known Secondary structure		T	T								T	T	T																		S																			T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	R	H	Q	D	E	L	R	A	M	T	E	S	L	P	E	N	A	S	T	Q	Q	Y	P	T	E	Y	V	Q	A	L	R	N	N	Q	L	A	A	A	I	D	D	A	N	L	T	P	D	I	R	A	D	I	H	A	E	L	V	R	L	S	F	M	P	T	R	S	E	S	E	R	Y	A	I	A	D	R	A
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	G	N	T	L	K	V	L	G	N	F	D	E	A	I	V	C	C	Q	R	H	L	D	I	S	R	E	L	N	D	K	V	G	E	A	R	A	L	Y	N	L	G	N	V	Y	H	A	K	G	K	S	F	G	V	G	E	F	P	E	E	V	R	D	A	L	Q	A	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T																			T	T																							T																	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	Y	A	A	L	E	I	L	W	H	D	N	P	D	R	T	A	Q	Y	Q	R	I	Q	V	D	H	L	G	A	L	L	T	R	D	R	Y	K	D	V	I	S	H	Y	Q	R	L	K	K	T	G	Q	I	I	P	P	W	G	Q	Y	W	V	A	S	A	Y	L	K	D	H	Q	P	K	K	A	Q	S	I	M
Query Conservation
Alig confidence		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	D	F	Y	E	E	N	L	S	L	V	T	A	L	G	D	R	A	A	Q	G	R	A	F	G	N	L	G	N	T	H	Y	L	L	G	N	F	R	D	A	V	I	A	H	E	Q	R	L	L	I	A	K	E	F	G	D	K	A	A	E	R	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.														T	T																				T																			T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	F	Y	H	K	E	T	I	A	P	D	L	S	D	E	E	L	A	D	L	F	Y	S	H	L	E	S	E	N	Y	P	G	A	L	T	V	T	Q	H	T	I	N	T	S	P	P	F	L	R	L	M	G	T	P	T	S	I	P	N	D	T	W	L	Q	G	H	S	F	L	S	T	V	A	K	Y	S	N	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	N	L	G	N	A	Y	I	F	L	G	E	F	E	T	A	S	E	Y	Y	K	K	T	L	L	L	A	R	Q	L	K	D	R	A	V	E	.	.	.	.	.	.	.	.	.	A	Q	S	C	Y	S	L	G	N	T	Y	T	L	L	Q	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T																			T	T						.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
																				238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.										.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		417	.	.	420	.	.	.	.	.	.	.	.	.	430							.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.							.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		L	P	Q	A	E	M	T	A	R	E	L	A	Y	N	.	.	.	.	.	.	A	P	G	N	Q	G	L	R	I	D	Y	A	S	V	L	Q	A	R	G	W	P	R	A	A	E	N	E	L	K	K	A	E	V	I	.	.	.	.	.	.	E	P	R	N	I	N	L	E	V	E	Q	A	W	T	A	L	T	L	Q
Query Conservation																.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	K	A	I	D	Y	H	L	K	H	L	A	I	A	Q	E	L	N	D	R	I	G	E	G	R	A	C	W	S	L	G	N	A	Y	T	A	L	G	N	H	D	Q	A	M	H	F	A	E	K	H	L	E	I	S	R	E	V	G	D	K	S	G	E	L	T	A	R	L	N	L	S	D	L	Q	M	V	L	G
Template Known Secondary structure																			T	T																				T																			T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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