Job Description P69434 Confidence 20.40% Date Thu Jan 5 12:11:38 GMT 2012 Rank 183 Aligned Residues 229 % Identity 13% Template c3rbhC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa Resolution 2.30 Å

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		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.												.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		L	A	G	V	E	W	R	S	R	N	I	W	L	E	A	E	Y	A	E	.	.	.	.	.	.	.	.	.	.	.	R	V	F	N	H	E	H	K	P	G	A	R	L	S	G	W	Y	D	F	N	D	N	W	R	I	G	S	Q	L	E	.	R	L	S	H	R	V	P	L	R	A	M	K	N	G	V	T	G	N	S
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		A	L	N	W	S	F	E	T	T	L	L	N	A	H	A	G	V	A	Q	R	F	S	E	Y	R	T	D	L	D	E	L	A	P	E	D	K	D	R	T	H	V	F	G	D	I	S	T	Q	W	A	P	H	H	R	I	G	V	R	I	H	H	A	D	D	S	D	K	T	Y	T	G	Q	L	T	W	L	G	I	E	A
Template Known Secondary structure										S	S											S				B	T	T			S			T	T	T	T	T														T	T																S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.						.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure																														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	A	Y	V	R	W	Y	Q	N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	S	N	.	.	.	.	.	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P	S	L	Y	Y	E	Q	N	T	E	H	D	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	D	A	Y	N	Y	R	S	S	X	P	L	N	Y	W	A	S	A	T	W	L	T	G	D	R	D	N	L	T	Q	S	G	D	V	N	A	F	G	V	D	L	G	L	R	W	N	I	D	E	Q	W	K	A	G	V	G	Y	A	R	G	S	G	G	G	K	D	G	E	E	Q	F	Q	Q	T	G	L	E	S	N
Template Known Secondary structure				S	T	T		T	T		S		S																																					S	S	S														S	G	G	G	T	T						S	B
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
																	712	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.											.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A	F	E	A	S	H	L	L	W	R	S	Y	E	N	S	W	E	Q	I	F	S	.	.	.	.	.	.	.	.	.	.	A	G	V	G	A	S	W	Q	K	H	Y	G	T	D	V	V	T	Q	L	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	N	F	T	G	T	R	S	R	V	H	R	F	G	E	A	F	R	G	E	L	S	N	L	Q	A	A	T	L	F	G	S	W	Q	L	R	E	D	Y	D	A	S	L	V	Y	H	K	F	W	R	V	D	D	D	S	D	I	G	T	S	G	I	N	A	A	L	Q	P	G	E	K	D	I	G	Q	E	L	D	L
Template Known Secondary structure					T	T	S	S	S	S				T	T		T	T	T				S	S	S													T	T	T													S	S	T	T	S						S							T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		767	.	.	770	.	.	.	.	.																	.	.	.	.	780	.	.	.	.	.	.	.	.	.		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		G	Q	R	I	S	W	N	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	G	A	T	L	R	W	E	K	R	P	Y	.	D	G	D	R	E	H	N	L	Y	V	E	F	D	M	T	F	R	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		V	V	T	K	Y	F	K	Q	G	L	L	P	A	S	X	S	Q	Y	V	D	E	P	S	A	L	I	R	F	R	G	G	L	F	K	P	G	D	A	Y	G	P	G	T	D	S	T	X	H	R	A	F	V	D	F	I	W	R	F
Template Known Secondary structure								S	S	S				T	T	S	G	G	G	G	T		S	S	S													T	T	S		T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions