Job Description P69434 Confidence 98.32% Date Thu Jan 5 12:11:38 GMT 2012 Rank 99 Aligned Residues 201 % Identity 4% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		T	R	D	R	Y	K	D	V	I	S	H	Y	Q	R	L	K	K	T	G	Q	I	I	P	P	W	G	Q	Y	W	V	A	S	A	Y	L	K	D	.	.	.	.	H	Q	P	K	K	A	Q	S	I	M	T	E	L	F	Y	H	K	E	T	I	A	P	D	L	S	D	E	E	L	A	D	L	F	Y	S	H	L	E	S
Query Conservation																																							.	.	.	.
Alig confidence																			.	.																			.	.	.	.
Template Conservation																			.	.
Template Sequence		M	E	N	E	N	K	P	N	V	A	N	F	E	A	A	V	A	.	.	A	K	D	Y	E	K	A	C	S	E	L	L	L	I	L	S	Q	L	D	S	N	F	G	G	I	Q	E	I	E	F	E	Y	P	A	Q	L	Q	D	L	E	Q	E	K	I	V	Y	F	C	T	R	M	A	T	A	I	T	T	L	F	S	D
Template Known Secondary structure			T	T	T	T			B										.	.	T	T																			T	T	T			T	T		B					G	G	G	T	T																							S
Template Predicted Secondary structure																			.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	Y	P	G	A	L	T	V	T	Q	H	T	I	N	T	S	P	P	F	L	R	L	M	G	T	P	T	S	I	P	N	D	T	W	L	Q	G	H	S	F	L	S	T	V	A	K	Y	S	N	D	L	P	Q	A	E	M	T	A	R	E	L	A	Y	N	A	P	G	N	Q	G	L	R	I	D	Y	A	S	V	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	L	E	I	S	D	L	G	V	Q	R	F	L	V	Y	Q	R	W	L	A	L	I	F	A	S	S	P	F	V	N	.	.	.	.	.	.	.	.	.	.	A	D	H	I	L	Q	T	Y	N	R	E	P	N	R	K	N	S	L	E	I	H	L	D	S	S	K	S	S	L	I	K	F	C	I	L	Y	L	P	E
Template Known Secondary structure		T	T														T										S	S	T	T		S	.	.	.	.	.	.	.	.	.	.	S					G	G	G				S			S		T	T	S					S														T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	G	W	P	R	A	A	E	N	E	L	K	K	A	E	V	I	E	P	R	N	I	N	L	E	V	E	Q	A	W	T	A	L	T	L	Q	E	W	Q	Q	A	A	V	L	T	H	D	V	V	E	R	E	P	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	V	N	L	N	L	D	V	M	W	N	I	S	P	E	L	C	A	S	L	C	F	A	L	Q	S	P	R	F	I	G	T	S	T	A	F	N	K	R	A	T	I	L	Q	W	F	P	R	H	L	D	Q	L	K	N	L
Template Known Secondary structure				S																										S				S																			T	T				S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions