Job Description P69434 Confidence 28.71% Date Thu Jan 5 12:11:38 GMT 2012 Rank 173 Aligned Residues 135 % Identity 12% Template c3mv2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 2.90 Å

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		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	E	L	A	D	L	F	Y	S	H	L	E	S	E	N	Y	P	G	A	L	T	V	T	Q	H	T	I	N	T	S	P	P	F	L	R	L	M	G	T	P	T	S	I	P	N	D	T	W	L	Q	G	H	S	F	L	S	T	V	A	K	Y	S	N	D	L	P	Q	A	E	M	T	A	R	E	L	A	Y	N	A
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	E	K	M	N	E	G	Y	K	N	F	K	L	N	K	P	D	I	A	I	E	C	F	R	E	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	I	T	L	L	M	V	D	D	A	E	D	E	K	L	A	H	K	I	L	E	T	A	R
Template Known Secondary structure															T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T			B		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.																												.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.			.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																	.
Query SS confidence																																.	.																	.
Query Sequence		P	G	N	Q	G	L	R	I	D	Y	A	S	V	L	Q	A	R	G	W	P	R	A	A	E	N	E	L	K	K	A	.	.	E	V	I	E	P	R	N	I	N	L	E	V	E	Q	A	W	.	T	A	L	T	L	Q	E	W	Q	Q	A	A	V	L	T	H	D	V	V	E	R	E	P	Q	D	P	G	V	V	R	L
Query Conservation																																.	.																	.
Alig confidence																																.	.																	.
Template Conservation
Template Sequence		E	Y	I	L	G	L	S	I	E	L	E	R	R	S	L	K	E	G	N	T	V	R	M	L	E	L	A	A	Y	F	T	K	A	K	L	S	P	I	H	R	T	N	A	L	Q	V	A	M	S	Q	H	F	K	H	K	N	F	L	Q	A	S	Y	F	A	G	E	F	L	K	I	I	S	S	G	P	R	A	E	Q	A
Template Known Secondary structure															T			T	T												G	G	G	S																					T	T														T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		1043	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.
		509	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	I	K	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1123	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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