Job Description P69434 Confidence 33.67% Date Thu Jan 5 12:11:38 GMT 2012 Rank 167 Aligned Residues 124 % Identity 7% Template c3kaeC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:possible protein of nuclear scaffold; PDBTitle: cdc27 n-terminus Resolution 2.30 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	G	N	T	Q	P	A	L	S	W	F	A	L	K	S	A	L	S	N	N	Q	I	A	D	W	L	Q	I	A	L	W	A	G	Q	D	K	Q	V	I	T	V	Y	N	R	Y	R	H	Q	Q	L	P	A	R	G	Y	A	A	V	A	V	A	Y	R	N	L	Q	Q	W	Q	N	S	L	T	L	W	Q	K	A	L
Query Conservation
Alig confidence																																														.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		R	Y	R	D	Y	E	T	A	I	F	L	A	A	C	L	L	P	C	K	P	E	Y	R	M	L	M	S	I	V	L	Y	L	N	G	E	Y	T	R	A	L	F	H	L	H	.	.	.	.	K	L	N	T	C	T	S	K	Y	Y	E	S	L	C	Y	K	K	K	K	D	Y	K	K	A	I	K	S	L	E	S	I	L
Template Known Secondary structure			T	T																	S	T	T											T	T											.	.	.	.	T			B														T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		126	.	.	.	130				.	.	.	.																.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure							.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	E	P	Q	.	.	.	N	K	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	G	Q	I	L	T	L	A	D	A	G	H	Y	D	T	A	L	V	K	L	K	Q	L	N	S	G	A	P	D	K	A	N	L	L	A	E	A	Y
Query Conservation							.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	K	V	E	R	D	P	D	V	D	A	R	I	Q	E	M	F	V	D	P	G	D	E	E	F	F	E	S	L	L	G	D	L	C	T	L	S	G	Y	R	E	E	G	I	G	H	Y	V	R	S	F	G	K	S	F	L	F	S	P	V	E	N	L	L	L
Template Known Secondary structure		T	T		S	B											T	T	S			T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions