Job Description P69434 Confidence 45.73% Date Thu Jan 5 12:11:38 GMT 2012 Rank 154 Aligned Residues 166 % Identity 11% Template c2y0kA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pyroglutatmate porin opdo; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.30 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	P	P	L	K	D	N	W	R	G	F	A	G	F	G	Y	A	D	G	Q	F	S	E	G	K	G	I	V	R	D	W	L	A	G	V	E	W	R	S	R	N	I	W	L	E	A	E	Y	A	E	R	V	F	N	H	E	H	K	P	G	A	R	L	S	G	W	Y	D	F	N	D	N	W	R	I	G	S	Q	L
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		H	T	L	D	L	G	R	S	L	K	S	D	L	R	F	A	R	A	S	E	D	G	G	F	R	E	L	D	N	R	A	F	G	A	L	F	S	L	R	L	G	A	H	A	V	A	A	G	Y	Q	.	R	I	S	G	D	D	P	Y	P	Y	I	A	G	S	D	P	Y	L	V	N	F	I	Q	I	G	D	F	G	N
Template Known Secondary structure																							T	T	S																	T	T									.				S	S	S					B	T	T	S					T	T			S	S					S
Template Predicted Secondary structure																																																				.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.								.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		E	R	L	S	H	R	V	P	L	R	A	M	K	N	G	V	T	G	N	S	A	Q	A	Y	V	R	W	Y	Q	N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	.	.	.	.	.	.	.	S	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	R	S	W	Q	L	R	Y	D	Y	D	F	G	A	L	G	L	P	G	L	S	F	M	S	R	Y	V	S	G	D	N	V	A	R	G	A	A	N	D	G	K	E	W	E	R	N	T	D	L	G	Y	V	V	Q	S	G	P	L	K	N	L	G	V	K	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													T	T	T	T		T	T																T	T																			S	S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	Y	E	Q	N	T	E	H	D	T	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A	F	E	A	S	H	L	L	W
Query Conservation
Alig confidence												.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		R	N	A	T	V	R	S	N	F	A	.	.	.	.	.	.	.	N	D	L	D	E	N	R	L	I	L	S	Y	S	L	A	L	W
Template Known Secondary structure									S	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.								.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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