Return to main results Retrieve Phyre Job Id

Job DescriptionP69434
Confidence96.83%DateThu Jan 5 12:11:38 GMT 2012
Rank114Aligned Residues199
% Identity10%Templatec2x4mD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   595....600.........610.........620.........630.........640.........650.........660.........670....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  YAERVFNHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRKYGVSWAFTDFSDSN
Query Conservation              
                             
    
                            

 
Alig confidence 



































...........


















.












Template Conservation 

 
 
 
 
                 
  

   
...........   

 
 



       .

  
 
  
 
 
Template Sequence  ISQLDWKIKNVAILKGDISWDPYSFLTLNARGWTSL. . . . . . . . . . . ASGSGNMDDYAWMNENQSE. WTDHSSHPATNVN
Template Known Secondary structure 

STT
...........SS


SS
SS.
S
T
Template Predicted Secondary structure 









...........














.









Template SS confidence 















































































   40.........50.........60.........70..... ....80.........90.... .....100.......
 
   675....680.........690.........700......... 710.........720.........730...
Predicted Secondary structure 






.....................









Query SS confidence 


































. . . . . . . . . . . . . . . . . . . . .























Query Sequence  QRHEVSLEGQERIWSSPYLIVDFLPSLYYEQNTEH. . . . . . . . . . . . . . . . . . . . . DTPYYNPIKTFDIVPAFEASHLLW
Query Conservation   
              
   
              .....................   
  
                 
Alig confidence 


































.....................





.
















Template Conservation   
   

 
    
      

   

 
    
 
 

 
 
         
     


 .
 
  




 
 
   
Template Sequence  HANEYDLNVKGWLLQDENYKAGITAGYQETRFSWTATGGSYSYNNGAYTGNFPKGVRVIGYN. QRFSMPYIGLAGQYRIN
Template Known Secondary structure  S


SSS
TTTT

TT
.T
Template Predicted Secondary structure 

























.
Template SS confidence 















































































   108.110.........120.........130.........140.........150.........160......... 170.........180......
 
   734.....740.........750. ........760.........770.........780.... .....790...
Predicted Secondary structure 









...........











.........







Query SS confidence 

















. . . . . . . . . . .
































. . . . . . . . .








Query Sequence  RSYENSWEQIFSAGVGAS. . . . . . . . . . . WQKHYGTDVVTQLGYGQRISWNDVIDAGATLRW. . . . . . . . . EKRPYDGDR
Query Conservation                 
  ...........                                 .........    


  
Alig confidence 
.















...........
































.........








Template Conservation   .  

  
  
  
 
   
 
 

 
 
 
             
 
 


  

 
   
      

 
      

Template Sequence  D. FELNALFKFSDWVRAHDNDEHYMRDLTFREKTSGSRYYGTVINAGYYVTPNAKVFAEFTYSKYDEGKGGTQTIDKNSG
Template Known Secondary structure  T.GGGTTTTTT
Template Predicted Secondary structure 
.



















Template SS confidence 















































































   187 ..190.........200.........210.........220.........230.........240.........250.........260.....
 
   794.... .800.......
Predicted Secondary structure 


.............
Query SS confidence 




. . . . . . . . . . . . .








Query Sequence  EHNLY. . . . . . . . . . . . . VEFDMTFRF
Query Conservation 
    .............        
Alig confidence 




.............








Template Conservation         
 

       

 

 
 
Template Sequence  DSVSIGGDAAGISNKNYTVTAGLQYRF
Template Known Secondary structure 
Template Predicted Secondary structure 





Template SS confidence 


























   266...270.........280.........290..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions