Job Description P69434 Confidence 95.23% Date Thu Jan 5 12:11:38 GMT 2012 Rank 126 Aligned Residues 201 % Identity 11% Template c2qomB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. Resolution 2.66 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.			.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure																					.	.																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																																																			.	.	.	.	.	.	.	.	.
Query Sequence		H	K	P	G	A	R	L	S	G	W	Y	D	F	N	D	N	W	R	I	.	.	G	S	Q	L	E	R	L	S	H	R	V	P	L	R	A	M	K	N	G	V	T	G	N	S	A	Q	A	Y	V	R	W	Y	Q	N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.																																																			.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	T	H	V	Q	V	G	V	D	K	K	H	E	L	G	L	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	T	F	A	T	R
Template Known Secondary structure																																				S	S																			T	T	S																			S
Template Predicted Secondary structure
Template SS confidence
		1059	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.
				673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.						.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure		.	.																																	.	.	.	.	.
Query SS confidence		.	.																																	.	.	.	.	.
Query Sequence		.	.	S	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P	S	L	Y	Y	E	.	.	.	.	.	Q	N	T	E	H	D	T	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A	F	E	A	S	H	L	L	W	R	S	Y	E	N	S	W	E	Q	I	F	S
Query Conservation		.	.																																	.	.	.	.	.
Alig confidence		.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A	W	K	D	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S	G	K	W	K	V	T	A	R
Template Known Secondary structure																						T	T																					B					S	B
Template Predicted Secondary structure
Template SS confidence
		1143	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.
		746	.	.	.	750	.	.																		.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	V	G	A	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	H	Y	G	T	D	V	V	T	Q	L	G	Y	G	Q	R	I	S	W	N	D	V	I	D	A	G	A	T	L	R	W	E	K	R	P	Y	D	G	D	R	E	H	N	L	Y	V	E	F	D	M	T	F	R	F
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																																																											.	.	.
Template Sequence		A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	.	.	.	A	F	G	K	Y	N	V	D	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure													T		T	T	B				T	T	S	S			S	S	S	S																T	T	T					.						.	.	.		S	S	S	S
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		1225	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.				.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions