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Job DescriptionP69434
Confidence99.67%DateThu Jan 5 12:11:38 GMT 2012
Rank32Aligned Residues193
% Identity31%Templatec2pl2A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:hypothetical conserved protein ttc0263; PDBTitle: crystal structure of ttc0263: a thermophilic tpr protein in thermus2 thermophilus hb27
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  PARGYAAVAVAYRNLQQWQNSLTLWQKALSLEPQNKDYQRGQILTLADAGHYDTALVKLKQLNSGAPDKANLLAEAYIYK
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Template Sequence  AEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAY
Template Known Secondary structure 

TT
TTSSS
TT

TT
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  LAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSFMPTRSESERYAIADRA
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Template Sequence  VA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   108.
 
   257..260.........270.........280.........290.........300.........310.........320.........330......
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Query Sequence  LAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAYLKDHQPKKAQSIM
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   337..340.........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  TELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSND
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Template Conservation  .................                              ...............                  
Template Sequence  . . . . . . . . . . . . . . . . . LYRQAEDRERGKGYLEQALSVLKDAERVNP. . . . . . . . . . . . . . . RYAPLHLQRGLVYALLGE
Template Known Secondary structure  .................T
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T...............T
TT
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   110.........120.........130......... 140.........150.......
 
   417..420.........430.........440.........450.........460.........470.........480
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Query Sequence  LPQAEMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVIEPRNINLEVEQAWTAL
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Template Conservation     
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Template Sequence  RDKAEASLKQALALED. TPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALL
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T
STT
T
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   158.160.........170... ......180.........190.........200.........210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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