Job Description P69434 Confidence 97.19% Date Thu Jan 5 12:11:38 GMT 2012 Rank 112 Aligned Residues 154 % Identity 14% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	A	Y	V	R	W	Y	Q	N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	S	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P	S	L	Y	Y	E	Q	N	T	E	H	D	T	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A
Query Conservation
Alig confidence											.																																	.	.																											.
Template Conservation											.																																	.	.																											.
Template Sequence		G	G	K	L	G	W	S	Q	Y	.	H	D	T	G	F	Y	G	N	G	F	Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	.	.	N	P	Y	L	G	F	E	M	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	.	F	K	A	Q	G	V	Q	L	T
Template Known Secondary structure								S			.			S						S				S				S																.	.		T	T																		S	S				S	.	S
Template Predicted Secondary structure											.																																	.	.																											.
Template SS confidence
		22	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750														.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	A	S	H	L	L	W	R	S	Y	E	N	S	W	E	Q	I	F	S	A	G	V	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	Q	K	H	Y	G	T	D	V	V	T	Q	L	G	Y	G	Q	R	I	S	W	N	D	V	I	D	A	G	A	T	L	R	W	E	K	R	P	Y	D	G	D
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		A	K	L	G	Y	P	I	T	D	D	.	.	.	.	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	A	T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G
Template Known Secondary structure								S	S	S	S	.	.	.	.																			S				S	S	S																						S	S	S								S	S		S	S					S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		793	.					.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		R	E	.	.	.	.	H	N	L	Y	V	E	F	D	M	T	F	R	F
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		T	V	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure						S	S		S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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