Job Description P69434 Confidence 96.08% Date Thu Jan 5 12:11:38 GMT 2012 Rank 123 Aligned Residues 137 % Identity 12% Template c2jmmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein Resolution UNK

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		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	S	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P	S	L	Y	Y	E	Q	N	T	E	H	D	T	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A	F	E	A	S	H	L	L	W	R
Query Conservation
Alig confidence																							.												.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.												.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	Y	S	R	E	N	Q	.	L	G	A	G	A	F	G	G	Y	Q	V	.	.	N	P	Y	V	G	F	E	M	G	Y	D	W	.	.	.	.	.	.	.	.	.	.	.	.	L	G	R	M	P	R	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	K
Template Known Secondary structure			S	S												T	T			S	S		.												.	.	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	S															T
Template Predicted Secondary structure																							.												.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.												.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	E	N	S	W	E	Q	I	F	S	A	G	V	G	A	S	W	Q	.	.	.	.	.	.	.	.	.	.	.	K	H	Y	G	T	D	V	V	T	Q	L	G	Y	G	Q	R	I	S	W	N	D	V	I	D	A	G	A	T	L	R	W	E	K	R	P	Y	D	G	D	R	E	H	N	L	Y	V	E	F	D	M
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																																																																									.
Template Sequence		L	G	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	S	D	K	D	G	N	G	Y	I	S	A	A	E	A	S	V	S	P	V	F	A	G	G	V	E	Y	V	I	R	R	R	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	N	A	S	D	.	N	G	M	L	S	L	G	V
Template Known Secondary structure		T		T	T	T													S	S	B						S	S	S						B																S	S	S		S	S	S											S	S	S	S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.
		804	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	R	F
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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