Return to main results Retrieve Phyre Job Id

Job DescriptionP69434
Confidence99.33%DateThu Jan 5 12:11:38 GMT 2012
Rank62Aligned Residues249
% Identity10%Templatec2ifuA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:gamma-snap; PDBTitle: crystal structure of a gamma-snap from danio rerio
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.........270....... ..280.........290.........300.........310..... ....320.
Predicted Secondary structure 




....








.....
Query SS confidence 


























. . . .





































. . . . .





Query Sequence  AIADRALAQYAALEILWHDNPDRTAQY. . . . QRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWG. . . . . QYWVAS
Query Conservation                             ....          
        
                  .....      
Alig confidence 


























....





































.....





Template Conservation   
  

      
   
   
     
   

  
   
  
        
     

             
     

 
Template Sequence  QKISEAHEHIAKAEKYLKTSFXKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGX
Template Known Secondary structure 


SSS
S

TT
TT
Template Predicted Secondary structure 

















Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  AYLKDHQPKKAQSIMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWL
Query Conservation            
                         

 
    
   

   
   
   
                  
Alig confidence 





































































.........
Template Conservation            
      

                              
      

            ......... 
Template Sequence  XLKDLQRXPEAVQYIEKASVXYVENGTPDTAAXALDRAGKLXEPLDLSKAVHLYQQAAAVFENEERLRQA. . . . . . . . . A
Template Known Secondary structure  TT
GGGGTTT
TTT
TT
.........
Template Predicted Secondary structure 



















.........
Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.. .
 
   402.......410.........420......... 430.........440.........450.........460... ......470.
Predicted Secondary structure 


......





....




Query SS confidence 



























. . . . . .

































. . . .







Query Sequence  QGHSFLSTVAKYSNDLPQAEMTARELAY. . . . . . NAPGNQGLRIDYASVLQARGWPRAAENELKKAEV. . . . IEPRNINL
Query Conservation        
      
    
   
  

 ......  
        

      
    
      

 ....
 
    
Alig confidence 



























......

































....







Template Conservation       
         
  
     


                          
    
     


             
Template Sequence  ELIGKASRLLVRQQKFDEAAASLQKEKSXYKEXENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSIPGFSGSEDCAA
Template Known Secondary structure  TT
TT
TT
TTSTTSTTS
Template Predicted Secondary structure 









Template SS confidence 















































































   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   472.......480.........490.........500.........
Predicted Secondary structure 






Query SS confidence 





































Query Sequence  EVEQAWTALTLQEWQQAAVLTHDVVEREPQDPGVVRLK
Query Conservation      
     
     
           
       
 
Alig confidence 







.




























Template Conservation     
   
.     
     
        
     
  
Template Sequence  LEDLLQAY. DEQDEEQLLRVCRSPLVTYXDNDYAKLAI
Template Known Secondary structure  .TT
TTSTS
Template Predicted Secondary structure  .




Template SS confidence 





































   234.....240. ........250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions