Job Description P69434 Confidence 99.95% Date Thu Jan 5 12:11:38 GMT 2012 Rank 7 Aligned Residues 432 % Identity 10% Template c2gw1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:mitochondrial precursor proteins import receptor; PDBTitle: crystal structure of the yeast tom70 Resolution 3.00 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	Q	I	A	D	W	L	Q	I	A	L	W	A	G	Q	D	K	Q	V	I	T	V	Y	N	R	Y	R	H	Q	Q	L	P	A	R	G	Y	A	A	V	A	V	A	Y	R	N	L	Q	Q	W	Q	N	S	L	T	L	W	Q	K	A	L	S	L	E	P	Q	N	K	D	Y	Q	R	G	Q	I	L	T	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	L	K	D	K	G	N	Q	F	F	R	N	K	K	Y	D	D	A	I	K	Y	Y	N	W	A	L	E	L	K	E	D	P	V	F	Y	S	N	L	S	A	C	Y	V	S	V	G	D	L	K	K	V	V	E	M	S	T	K	A	L	E	L	K	P	D	Y	S	K	V	L	L	R	R	A	S	A	N	E	G
Template Known Secondary structure															T	S																																	T																	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	G	H	Y	D	T	A	L	V	K	L	K	Q	L	N	S	G	A	P	D	K	A	N	L	.	L	A	E	A	Y	I	Y	K	L	A	G	R	H	Q	D	E	L	R	A	M	T	E	S	L	P	E	N	A	S	T	Q	Q	Y	P	T	E	Y	V	Q	A	L	R	N	N	Q	L	A	A	A	I	D	D	A	N	L
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		L	G	K	F	A	D	A	M	F	D	L	S	V	L	S	L	N	G	D	F	N	D	A	S	I	E	P	M	L	E	R	N	L	N	K	Q	A	M	S	K	L	K	E	K	N	L	P	S	V	T	S	M	A	S	F	F	G	I	F	K	P	E	L	T	F	A	N	Y	D	E	S	N	E	A	D	K	E	L	M	N
Template Known Secondary structure		T	T															S	S	S			G	G	G	T																	T	T														T	T	S							S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	I	R	A	D	I	H	A	E	L	V	R	L	S	F	M	P	T	R	S	E	S	E	R	Y	A	I	A	D	R	A	L	A	Q	Y	A	A	L	E	I	L	W	H	D	N	P	D	R	T	A	Q	Y	Q	R	I	Q	V	D	H	L	G	A	L	L	T	R	D	R	Y	K	D	V	I	S	H	Y	Q	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	S	N	L	Y	K	R	S	P	E	S	Y	D	K	A	D	.	.	.	.	.	.	.	.	.	.	E	S	F	T	K	A	A	R	L	F	E	E	Q	L	D	K	N	N	E	D	E	K	L	K	E	K	L	A	I	S	L	E	H	T	G	I	F	K	F	L	K	N	D	P	L	G	A	H	E	D	I	K	K
Template Known Secondary structure							S	S			T	T							.	.	.	.	.	.	.	.	.	.														T	T	T	S	T	T																						S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.											.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	K	T	G	Q	I	I	P	P	W	G	Q	Y	W	V	A	S	A	Y	L	K	D	H	Q	P	K	K	A	Q	S	I	M	T	E	L	F	Y	H	K	E	T	I	A	P	D	L	S	D	E	E	L	A	D	L	F	Y	S	H	L	E	S	E	N	Y	P	G	A	L	T	V	T	Q	H	T	I	N	T	S	P
Query Conservation
Alig confidence								.	.																																		.	.	.	.	.
Template Conservation								.	.																																		.	.	.	.	.
Template Sequence		A	I	E	L	F	P	.	.	R	V	N	S	Y	I	Y	M	A	L	I	M	A	D	R	N	D	S	T	E	Y	Y	N	Y	F	D	K	A	L	K	L	D	S	.	.	.	.	.	N	N	S	S	V	Y	Y	H	R	G	Q	M	N	F	I	L	Q	N	Y	D	Q	A	G	K	D	F	D	K	A	K	E	L	D	P
Template Known Secondary structure								.	.														T	S	S			T	T	G	G	G							T	T		T	.	.	.	.	.	T		T													T	T		T	T												T		S
Template Predicted Secondary structure								.	.																																		.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		384	.																				.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Query Sequence		P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	L	M	G	T	P	T	S	I	P	N	D	T	W	L	Q	G	H	S	F	L	S	T	V	A	K	Y	S	N	D	L	P	Q	A	E	M	T	A	R	E	L	A	Y	N	A	P	G	N	Q	G	L	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	I	F	P	Y	I	Q	L	A	C	L	A	Y	R	E	N	K	F	D	D	C	E	T	L	F	S	E	A	K	R	K	F	P	E	A	P	E	V	P	N	F	F	A	E	I	L	T	D	K	N	D	F	D	K	A	L	K	Q	Y	D	L	A	I	E	L	E	N	K	L	D	G	I	Y	V	G	I	A	P	L
Template Known Secondary structure		S		S										T	T	T	T	T																S	T	T		S													T	T																		T	S	S	S		S	S		S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
				438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	I	D	Y	A	S	V	L	Q	A	R	G	W	P	R	A	A	E	N	E	L	K	K	A	E	V	I	E	P	R	N	I	N	L	E	V	E	Q	A	W	T	A	L	T	L	Q	E	W	Q	Q	A	A	V	L	T	H	D	V	V	E	R	E	P	Q	D	P	G	V	V	R	L	K	R	A	V	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	G	K	A	T	L	L	T	R	N	P	T	V	E	N	F	I	E	A	T	N	L	L	E	K	A	S	K	L	D	P	R	S	E	Q	A	K	I	G	L	A	Q	M	K	L	Q	Q	E	D	I	D	E	A	I	T	L	F	E	E	S	A	D	L	A	R	T	M	E	E	K	L	Q	A	I	T	F	A	E
Template Known Secondary structure										T	S			T	T																	T	T															T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.