Job Description P69434 Confidence 93.35% Date Thu Jan 5 12:11:38 GMT 2012 Rank 133 Aligned Residues 147 % Identity 11% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.						.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		E	R	R	K	Y	G	V	S	W	A	F	T	D	F	S	D	S	.	.	.	.	.	N	Q	R	H	E	V	S	L	E	G	Q	E	R	I	W	S	S	P	Y	L	I	V	D	F	L	P	S	L	Y	Y	E	Q	N	T	E	H	D	T	P	Y	Y	N	P	I	K	T	F	D	I	V	P	A	F	E	A	S	H	L
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																																							.	.	.
Template Conservation																																																														.	.	.
Template Sequence		G	E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	G	G	G	F	S	V	T	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	.	.	.	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y
Template Known Secondary structure		T																																					T	T									S									T	T	T		.	.	.
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		732	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.																	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.							.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		L	W	R	S	Y	E	N	S	W	E	Q	I	F	S	A	G	V	G	A	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	H	Y	G	T	D	V	V	T	Q	L	G	Y	G	Q	R	I	S	W	N	D	V	I	D	A	G	A	T	L	R	W	E	.	.	.	.	.	.	K	R	P	Y
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L
Template Known Secondary structure		.		S		T	T		S																										T	T																							S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		790	.	.							.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		D	G	D	.	.	.	.	.	.	R	E	H	N	L	Y	V	E	F	D	M	T	F	R	F
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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