Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9U3
Confidence100.00%DateThu Jan 5 11:11:24 GMT 2012
Rank40Aligned Residues230
% Identity22%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   293......300.........310.........320.........330.........340.........350.........360.........370..
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Query Sequence  KLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPD
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Template Sequence  NMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDIS
Template Known Secondary structure  T
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   563......570.........580.........590.........600.........610.........620.........630.........640..
 
   373......380 .........390.........400.........410.........420.........430.......
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Query Sequence  SGTVKWSE. . . . . . . . . . . NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAK. . . .
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Template Sequence  SGCIRIDGQDISQVTQASLRSHIGVVPQDT. . . VLFNDTIADNIRYGRVTAGND. EVEAAAQAAGIHDAIMAFPEGYRTQ
Template Known Secondary structure  TTGGGS
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STTSTT

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   644.....650.........660.........670... ......680.........690.... .....700.........710.........
 
   438.440.........450.........460.........470.........480.... .....490.........500.........
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Query Sequence  . . . . . . VLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELY. . QGTLIFVSHDREFVSSLATRILEIT
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Template Sequence  VGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVV. NADQILVIK
Template Known Secondary structure  STTSB




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   720.........730.........740.........750.........760.........770.........780......... 790........
 
   510.........520........
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Query Sequence  PERVIDFSGNYEDYLRSKG
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Template Sequence  DGCIVE. RGRHEALLSRGG
Template Known Secondary structure  TT.
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   799800.... .....810......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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