Job Description P0A9U3 Confidence 97.18% Date Thu Jan 5 11:11:24 GMT 2012 Rank 139 Aligned Residues 121 % Identity 12% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	G	E	K	L	A	V	L	G	T	N	G	V	G	K	S	T	L	L	K	T	L	V	G	D	L	Q	P	D	S	G	T	V	K	W	S	E	N	A	R	I	G	Y	Y	A	Q	D	H	E	Y	E	F	E	N	D	L	T	V	F	E	W	M	S	Q	W	K	Q	E	G	D	D	E	Q	A	V	R	S	I	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	.	.	.	.	.	.	.	.	K	N	H	G	F	S	V	V	I	A	A	S	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	A	G	A	I	E	Q	L	E	E	H	A
Template Known Secondary structure			S										T	T	S	S													.	.	.	.	.	.	.	.			T	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.	160	.																			.	.	.	.	.	.	.	.	170	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.
Predicted Secondary structure																																														.																					.	.
Query SS confidence																																														.																					.	.
Query Sequence		G	R	L	L	F	S	Q	D	D	I	K	K	P	A	K	V	L	S	G	G	E	K	G	R	M	L	F	G	K	L	M	M	Q	K	P	N	I	L	I	M	D	E	P	T	.	N	H	L	D	M	E	S	I	E	S	L	N	M	A	L	E	L	Y	Q	G	.	.	T	L	I	F	V	S
Query Conservation																																														.																					.	.
Alig confidence								.																							.	.														.																					.	.
Template Conservation								.																							.	.
Template Sequence		K	R	I	G	V	K	.	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	.	.	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D
Template Known Secondary structure				T	T			.					S	T	T																.	.			T		S								S	S			S	S	S																S
Template Predicted Secondary structure								.																							.	.
Template SS confidence
		175	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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