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Job DescriptionP0A9U3
Confidence100.00%DateThu Jan 5 11:11:24 GMT 2012
Rank38Aligned Residues220
% Identity22%Templatec2yl4A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   298.300.........310.........320......... 330.........340.........350.........360.........370....
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Query Sequence  KASSRQNPFIRFEQDKKLFRNALEVEGLTKGF. . . DNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSG
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Template Sequence  EREPKLPFNEGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASG
Template Known Secondary structure  T


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   470.........480.........490.........500.........510.........520.........530.........540.........
 
   375....380 .........390.........400.........410 .........420.........430.....
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Query Sequence  TVKWSE. . . . . . . . . . . NARIGYYAQDHEYEFENDLTVFEWMSQWKQ. . EGDDEQAVRSILGRLLFSQDDIKKP. . . . . .
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Template Sequence  TISLDGHDIRQLNPVWLRSKIGTVSQEP. . . ILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTV
Template Known Secondary structure  TTTTTB
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   550.........560.........570....... ..580.........590.........600.........610.........620......
 
   436...440.........450.........460.........470.........480.... .....490.........500.........
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Query Sequence  . . . . AKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELY. . QGTLIFVSHDREFVSSLATRILEIT
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Template Sequence  VGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKN. ANMVAVLD
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   627..630.........640.........650.........660.........670.........680.........690....... ..700.....
 
   510.........520..
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Query Sequence  PERVIDFSGNYED
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Template Sequence  QGKITE. YGKHEE
Template Known Secondary structure  TT.
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   706...710. ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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