Job Description P0A9U3 Confidence 100.00% Date Thu Jan 5 11:11:24 GMT 2012 Rank 56 Aligned Residues 200 % Identity 24% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380												.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	L	F	R	N	A	L	E	V	E	G	L	T	K	G	F	D	N	G	P	L	F	K	N	L	N	L	L	L	E	V	G	E	K	L	A	V	L	G	T	N	G	V	G	K	S	T	L	L	K	T	L	V	G	D	L	Q	P	D	S	G	T	V	K	W	S	E	.	.	.	.	.	.	.	.	.	.	.	N
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																																								.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																																								.
Template Sequence		E	K	K	F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R
Template Known Secondary structure			T	T	T																.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S
Template Predicted Secondary structure																					.	.																																								.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		A	R	I	G	Y	Y	A	Q	D	H	E	Y	E	F	E	N	D	L	T	V	F	E	W	M	S	Q	W	K	Q	E	G	D	D	E	Q	A	V	R	S	I	L	G	R	L	L	F	S	Q	D	D	I	K	K	P	A	K	V	.	.	.	.	L	S	G	G	E	K	G	R	M	L	F	G	K	L	M	M	Q	K	P
Query Conservation																																																											.	.	.	.
Alig confidence												.	.	.													.																																.	.	.	.
Template Conservation												.	.	.													.
Template Sequence		S	I	I	G	I	V	P	Q	D	T	.	.	.	I	L	F	N	E	T	I	K	Y	N	I	L	.	Y	G	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P
Template Known Secondary structure		T	T						S	S		.	.	.				S	S	B							.	T	T	S	T	T													T	T								S	T	T	G	G	G		B																		T
Template Predicted Secondary structure												.	.	.													.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	I	M	D	E	P	T	N	H	L	D	M	E	S	I	E	S	L	N	M	A	L	E	L	Y	Q	G	T	L	I	F	V	S	H	D	R	E	F	V	S	S	L	A	T	R	I	L	E	I	T	P	E	R	V	I	D	F	S	G	N	Y	E	D	Y	L	R	S	K	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.																							.																.
Template Conservation														.	.	.	.	.	.	.																							.																.
Template Sequence		K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	.	E	K	G	T	H	K	D	L	L	K	L	N	G
Template Known Secondary structure		S												.	.	.	.	.	.	.																	S	S	G	G	G	S	.	T	T		S							T	T				.												T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																							.																.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions