Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9U3
Confidence100.00%DateThu Jan 5 11:11:24 GMT 2012
Rank21Aligned Residues215
% Identity23%Templatec1vciA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.. ......
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Query Sequence  LVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQD. . . QFAFEE
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Template Sequence  VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQH
Template Known Secondary structure  TT
TT


TTSSTSS

STT
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  FTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAP
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Template Sequence  MTVYENI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AFPLKKFPKDEIDKRVRWAAELLQI. EELLNRYPAQLSG
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TT
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GGG

S
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   99100..... ....110.........120.........130 .........140...
 
   159160.........170.........180.........190.........200 .........210.........220.........230....
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Query Sequence  GWKLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNE. . . . RDSTMIIISHDRHFLNMVCTHMADLDYGELRVYP
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Template Sequence  GQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQL. LQI
Template Known Secondary structure  S
TT

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   146...150.........160.........170.........180.........190.........200.........210.........220. ...
 
   235....240.........250..
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Query Sequence  GNYDEYMTAATQARERLL
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Template Sequence  GSPTEVYLRPNSVFVATF
Template Known Secondary structure 
S
SB
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   225....230.........240..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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