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28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
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. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  | . | . |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |
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| . |
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Query SS confidence |   |
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| . |
. |
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| . |
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| . |
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Query Sequence |   |
I | T | V | N | G | K | V | V | A | K | P | C | T | V | S | . |
. |
T | T | N | A | T | V | D | L | G | D | L | Y | S | F | S | L | M | S | A | G | A | A | S | A | W | H | D | V | A | L | E | L | T | N | C | P | . |
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V | G | T | S | R | V | T | A | S | F | S | G | A | A | D | S | T | . |
G |
Query Conservation |   |
|   |   |   |
|   |
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|   |
|   | . | . |   |   |   |   |   |
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|   |
|   |
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|   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . |   |
Alig confidence |   |
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| . | . |
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| . |
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Template Conservation |   |
|   |
|   |
|   |
|   |   |   |
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|   |
|   |   |   |   |   |   |   |   |
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|   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | A | F | H | G | E | V | V | R | P | A | C | T | L | A | M | E | D | A | W | Q | I | I | D | M | G | E | T | P | V | R | D | L | Q | N | . |
G | F | S | G | P | E | R | K | F | S | L | R | L | R | N | C | E | F | N | S | Q | G | G | N | L | F | S | D | S | R | I | R | V | T | F | D | G | V | R | G | E | T | P | D |
Template Known Secondary structure |   |
| S | S |
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|  |  |  |
| S | S | T | T |
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| S |
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|  |  |  |  |  | T | . | T | S |
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|  |  |  |  |  |  |  |  | S | S |
|
|  |  | T | T |  |  | T | T | T | T | T | S |  |  |  |  |  |  | S |
| B |
| S | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
Y | Y | K | N | Q | G | T | A | Q | N | I | Q | L | E | L | Q | D | D | S | G | N | T | L | N | T | G | A | T | K | T | V | Q | V | D | D | S | S | Q | S | A | H | F | P | L | Q | V | R | A | L | T | V | N | G | G | A | T | Q | G | T | I | Q | A | V | I | S | I | T | Y | T | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
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|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
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|   |
|   |   |   |
|   |   |
|   |   |
|   |
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Alig confidence |   |
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| . |
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Template Conservation |   |
  |   |   |   |   |   |   |
|   |
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|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|
Template Sequence |   |
K | F | N | L | S | G | Q | A | K | G | I | N | L | Q | I | A | D | V | R | G | N | I | A | R | A | G | K | V | M | P | . |
A | I | P | L | T | G | N | E | E | A | L | D | Y | T | L | R | I | V | R | N | G | K | K | L | E | A | G | N | Y | F | A | V | L | G | F | R | V | D | Y |
Template Known Secondary structure |   |
| B |
|
|  |  | S |
| B | S |  |  |  |  |  |  |
| T | T |
|
| B |
|
| T | T |
| B |
|
| . |
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|
| S | T | T |
| S |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
| B |
| S |
|  |  |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |
|
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|  |  |  |  |  |  |
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|  |  |  |
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|  |  | . |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |