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Job DescriptionP08190
Confidence99.79%DateThu Jan 5 11:00:46 GMT 2012
Rank13Aligned Residues119
% Identity17%Templatec2w07B_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:minor pilin subunit papf; PDBTitle: structural determinants of polymerization reactivity of the2 p pilus adaptor subunit papf
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.. .......50.........60.........70.........80.........90.........100.........110.
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Query Sequence  KVVAKPCTVS. TTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLEL
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Template Sequence  NVYIPPCTINNGQNIVVDFGNINPEHVDNSRGE. . . VTKTISIS. CPYGSLWIKVTGNTMGGGQNNVL. ATNITHFGIAL
Template Known Secondary structure 

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GGG







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B
SSS
SS.
SSTT
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   910.........20.........30.........40. ........ 50.........60.........70.. .......80...
 
   112.......120.........130.........140........ .150.........160.......
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Query Sequence  QDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVN. GGATQGTIQAVISITYTYS
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Template Sequence  YQGKGMSTPLT. . . . . . . . . . . LRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
Template Known Secondary structure  SSSSSSB

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   86...90...... ...100.........110.........120.........130.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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