 |
Job Description | P0ADP2 | Confidence | 98.25% | Date | Thu Jan 5 11:21:28 GMT 2012 |
Rank | 67 | Aligned Residues | 95 |
% Identity | 20% | Template | c3rd7A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:acyl-coa thioesterase; |
PDBTitle: crystal structure of acyl-coa thioesterase from mycobacterium avium
|
Resolution | 1.95 Å |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | L | E | R | Y | E | K | E | F | A | Q | L | A | F | K | N | Q | P | M | M | V | G | N | W | A | Q | S | I | L | H | G | G | V | I | A | S | A | L | D | V | A | A | G | L | V | C | V | G | S | T | L | T | R | H | E | T | I | S | E | D | E | L | R | Q | R | L | S | R | M | G | T | I | D | L | R | V | D | Y | L |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |   | . | . |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |
|   |   |
|
|
Template Sequence |   |
L | D | L | Q | Q | I | D | D | A | A | F | V | G | . |
. |
. |
. |
. |
T | Q | P | D | T | . |
. |
P | N | H | H | I | I | G | S | Q | V | A | A | Q | A | L | M | A | A | G | R | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | P | G | R | L | A | H | S | M | H | M | Y | F | L |
Template Known Secondary structure |   |
T |
|
|  |  |  |  | T | T |  |  |  |  | . | . | . | . | . |
|
|
|
|
| . | . | T | T |
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | T | T |
|  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|  |  |
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
  |   |
110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | G | R | G | E | . |
R | F | T | A | T | S | S | L | L | R | A | G | N | K | V | A | V | A | R | V | E | L | H | N | E | E | Q | L | Y | I | A | S | A | T | A | T | Y |
Query Conservation |   |
  |
|   |   |   |   | . |   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|   |
|
|
|   |   |   |
|   |
|   |   |   |
|   | . |
|   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
R | R | G | D | A | R | Q | P | I | Q | Y | D | V | T | P | L | R | D | G | G | T | I | S | S | R | R | V | T | A | S | Q | S | . |
G | V | V | L | F | E | A | L | A | S | F |
Template Known Secondary structure |   |
S |
|
| B | T | T | S |
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|