Job Description P0ADP2 Confidence 99.94% Date Thu Jan 5 11:21:28 GMT 2012 Rank 28 Aligned Residues 130 % Identity 17% Template c3bnvD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cj0977; PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence protein2 from campylobacter jejuni. Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	S	A	V	L	T	A	E	Q	A	L	K	L	V	G	E	M	F	V	Y	H	M	P	F	N	R	A	L	G	M	E	L	E	R	Y	E	K	E	F	A	Q	L	A	F	K	N	Q	P	M	.	M	V	G	N	W	A	Q	S	I	L	H	G	G	V	I	A	S	A	L	D	V	A	A	G	L	V	C	V	G	S
Query Conservation																																																			.
Alig confidence												.																																							.				.	.
Template Conservation												.																																											.	.
Template Sequence		L	E	E	Y	A	S	A	E	D	I	.	S	R	V	R	A	E	L	L	T	C	P	E	L	N	T	S	L	A	G	T	I	I	E	I	D	K	N	Y	A	K	S	I	L	I	T	T	S	E	X	V	A	D	.	.	D	Q	G	L	I	F	D	A	F	I	F	A	A	A	N	Y	V	A	Q	A	S	I	N	K	E
Template Known Secondary structure		G	G	G	T	S						.									S		T	T														T	T										G	G	G	B	S	S	.	.	T	T		B	B		T																		S
Template Predicted Secondary structure												.																																											.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																				.															.
Query SS confidence																																				.															.
Query Sequence		T	L	T	R	H	E	T	I	S	E	D	E	L	R	Q	R	L	S	R	M	G	T	I	D	L	R	V	D	Y	L	R	P	G	R	.	G	E	R	F	T	A	T	S	S	L	L	R	A	G	.	N	K	V	A	V	A	R	V	E	L	H	N	E	E	Q	L	Y	I	A	S	A	T	A	T	Y	M	V
Query Conservation																																				.															.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.															.															.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Sequence		F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	I	G	S	K	C	F	F	Y	A	P	L	K	L	G	D	V	L	E	L	E	A	H	A	L	F	D	E	T	S	K	K	R	D	V	K	V	V	G	H	V	K	E	.	.	.	I	K	X	F	E	G	T	I	Q	V
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S			B	T	T													S	S		S											T	T	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template SS confidence
		90																			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions