Job Description P0ADP2 Confidence 99.86% Date Thu Jan 5 11:21:28 GMT 2012 Rank 33 Aligned Residues 128 % Identity 19% Template c2f3xA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:transcription factor fapr; PDBTitle: crystal structure of fapr (in complex with effector)- a2 global regulator of fatty acid biosynthesis in b. subtilis Resolution 3.10 Å

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		5	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																								.														.
Query SS confidence													.	.	.	.	.	.	.																								.														.
Query Sequence		L	T	A	E	Q	A	L	K	L	V	G	.	.	.	.	.	.	.	E	M	F	V	Y	H	M	P	F	N	R	A	L	G	M	E	L	E	R	Y	E	K	E	.	F	A	Q	L	A	F	K	N	Q	P	M	M	V	.	G	N	W	A	Q	S	I	L	H	G	G	V	I	A	S	A	L	D	V	A	A	G	L	V
Query Conservation													.	.	.	.	.	.	.																								.														.
Alig confidence													.	.	.	.	.	.	.															.									.														.		.	.
Template Conservation																																		.																									.	.
Template Sequence		L	S	I	P	E	L	R	E	R	I	K	N	V	A	E	K	T	L	E	D	E	V	K	S	L	S	L	D	E	V	I	G	.	E	I	I	D	L	E	L	D	D	Q	A	I	S	I	L	E	I	K	Q	E	H	V	F	S	.	.	R	N	Q	I	A	R	G	H	H	L	F	A	Q	A	N	S	L	A	V	A	V
Template Known Secondary structure																					T	S			S	S		G	G	G	S	S	S	.							T	T	T										G	G	G	B		T	.	.	T	T		B	B																T
Template Predicted Secondary structure																																		.																									.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																								.																												.
Query SS confidence																																								.																												.
Query Sequence		C	V	G	S	T	L	T	R	H	E	T	I	S	E	D	E	L	R	Q	R	L	S	R	M	G	T	I	D	L	R	V	D	Y	L	R	P	G	R	.	G	E	R	F	T	A	T	S	S	L	L	R	A	G	N	K	V	A	V	A	R	V	E	L	H	N	E	.	E	Q	L	Y	I	A	S	A	T	A	T	Y	M
Query Conservation																																								.																												.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																												.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	D	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	T	A	S	A	D	I	R	F	T	R	Q	V	K	Q	G	E	R	V	V	A	K	A	K	V	T	A	V	E	K	E	K	G	R	T	V	V	E	V	N	S	Y	V	G	E	E	I	V	F	S	G	R	F	D	M	Y
Template Known Secondary structure		S		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S			B	T	T														T	G	G	G											T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.																			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions