 |
Job Description | P30870 | Confidence | 11.00% | Date | Thu Jan 5 11:46:43 GMT 2012 |
Rank | 93 | Aligned Residues | 102 |
% Identity | 17% | Template | d1jboa_ |
SCOP info | Globin-like
| Globin-like
| Phycocyanin-like phycobilisome proteins
|
Resolution | 1.45 |
|
 |
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
|
. | . | . | . | . | . | 320 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 330 | . | |
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | M | L | R | P | F | V | F | R | R | Y | I | D | F | S | V | I | Q | S | L | R | N | M | K | G | M | I | A | R | E | V | R | R | R | G | L | T | . |
. |
D | N | I | K | L | G | A | G | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | E | I | E | F | I | V | Q | . |
. |
V | F | Q | L | I | R | G | G |
Query Conservation |   |
  |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |
|
|
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|
| . | . |   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|
Template Sequence |   |
L | Q | A | V | D | G | R | F | K | R | A | V | A | S | M | E | A | A | R | A | L | T | N | N | A | Q | S | L | I | D | G | A | A | Q | A | V | Y | Q | K | F | P | Y | T | T | T | M | Q | G | S | Q | Y | A | S | T | P | E | G | K | A | K | C | A | R | D | I | G | Y | Y | L | R | M | V | T | Y | C | L | V | A | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | T | S |
| S | T | T | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
340 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | |
|
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | P | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Q | S | R | . |
. |
S | L | L | P | T | L | S | A | I | A | E | L | H | L | L | S | E | N | D | A | E | Q | L | R | V | A | Y | L | F | L |
Query Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   | . | . |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
T | G | P | M | D | E | Y | L | I | A | G | L | S | E | I | N | S | T | F | D | L | S | P | S | W | Y | I | E | A | L | K | Y | I | K | A | N | H | G | L | T | G | Q | A | A | V | E | A | N | A | Y | I | D | Y | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|