Job Description P30870 Confidence 18.15% Date Thu Jan 5 11:46:43 GMT 2012 Rank 47 Aligned Residues 71 % Identity 11% Template c3nybA_ PDB info PDB header:transferase/rna binding protein Chain: A: PDB Molecule:poly(a) rna polymerase protein 2; PDBTitle: structure and function of the polymerase core of tramp, a rna2 surveillance complex Resolution 2.70 Å

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		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	L	A	E	A	M	I	D	A	V	V	Q	Q	A	W	V	Q	M	V	A	R	Y	G	K	P	N	H	L	N	E	R	E	G	R	G	F	A	V	V	G	Y	G	K	L	G	G	W	E	L	G	Y	S	S	D	L	D	L	I	F	L	H	D	C	P	M	D	A	M	T	D	G	E	R	E	I	D	G	R	Q
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Sequence		S	R	E	E	I	E	I	R	N	Q	T	I	S	T	I	R	E	A	V	K	Q	L	.	.	.	.	.	.	.	.	.	.	.	W	P	D	A	D	L	H	V	F	G	S	Y	S	T	D	L	Y	L	P	G	S	D	I	D	C	V	V	T	S	E	L	G	G	K	.	.	.	.	.	.	.	.	.	E	S	R	N
Template Known Secondary structure																						T	T	.	.	.	.	.	.	.	.	.	.	.		T	T							S	T	T	T	T	T				T	T	S								S	S			G	G	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.
		727	.	.	730	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	L	R	L	A	Q	R	I	M	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	Y	S	L	A	S	H	L	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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