Job Description P30870 Confidence 87.27% Date Thu Jan 5 11:46:43 GMT 2012 Rank 10 Aligned Residues 102 % Identity 15% Template c3c66B_ PDB info PDB header:transferase Chain: B: PDB Molecule:poly(a) polymerase; PDBTitle: yeast poly(a) polymerase in complex with fip1 residues 80-105 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	R	R	I	M	V	R	I	A	W	A	Q	T	L	A	L	V	T	E	E	S	I	L	Q	Q	L	S	Y	L	A	E	T	L	I	V	A	A	R	D	W	L	Y	D	A	C	C	R	E	W	G	T	P	C	N	A	Q	G	E	A	Q	P	L	L	I	L	G	M	G	K	L	G	G	G	E	L	N	F	S	S
Query Conservation
Alig confidence																																	.	.																							.
Template Conservation																																	.	.																							.
Template Sequence		N	K	L	N	D	S	L	I	Q	E	L	K	K	E	G	S	F	E	T	E	Q	E	T	A	N	R	V	Q	V	L	K	.	.	I	L	Q	E	L	A	Q	R	F	V	Y	E	V	S	K	K	K	N	M	S	D	G	.	M	A	R	D	A	G	G	K	I	F	T	Y	G	S	Y	R	L	G	V	H	G	P	G	S
Template Known Secondary structure															T	T		S															.	.																T	T	T					.					T	B												T				S	S
Template Predicted Secondary structure																																	.	.																							.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	L	I	F	A	W	P	E	H	G	C	T	Q	G	G	R	R	E	L	D	N	A	Q	F	F	T	R	M	G	Q	R	L
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		D	I	D	T	L	V	V	V	P	.	.	.	.	.	.	.	.	.	K	H	V	T	R	E	D	F	F	T	V	F	D	S	L	L
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	T	T							T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions