Job Description P30870 Confidence 18.14% Date Thu Jan 5 11:46:43 GMT 2012 Rank 48 Aligned Residues 77 % Identity 14% Template c2ihmA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide Resolution 2.40 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	Q	T	L	A	L	V	T	E	E	S	I	L	Q	Q	L	S	Y	L	A	E	T	L	I	V	A	A	R	D	W	L	Y	D	A	C	C	R	E	W	G	T	P	C	N	A	Q	G	E	A	Q	P	L	L	I	L	G	M	G	K	L	G	G	G	E	L	N	F	S	S	D	I	D	L	I	F	A	W	P	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		Y	Q	D	L	S	T	P	V	R	R	A	D	A	E	A	L	Q	Q	L	I	E	A	A	V	R	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	A	T	V	T	L	T	G	G	F	.	R	R	G	K	L	Q	G	H	D	V	D	F	L	I	T	H	P	E
Template Known Secondary structure							S																				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										.		T	T		S			S									S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																							310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	C	T	Q	G	G	R	R	E	L	D	N	A	Q	F	F	T	R	M	G	Q	R	L	I	K	V	L	D	Q	P	T	Q
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	Q	E	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	P	K	V	M	S	C	L	Q	S	Q	G	L
Template Known Secondary structure		T	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.														.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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