Job Description P30870 Confidence 100.00% Date Thu Jan 5 11:46:43 GMT 2012 Rank 2 Aligned Residues 429 % Identity 97% Template c1v4aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamate-ammonia-ligase adenylyltransferase; PDBTitle: structure of the n-terminal domain of escherichia coli2 glutamine synthetase adenylyltransferase Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	P	L	S	S	P	L	Q	Q	Y	W	Q	T	V	V	E	R	L	P	E	P	L	A	E	E	S	L	S	A	Q	A	K	S	V	L	T	F	S	D	F	V	Q	D	S	V	I	A	H	P	E	W	L	T	E	L	E	S	Q	P	P	Q	A	D	E	W	Q	H	Y	A	A	W	L	Q	E	A	L	C	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	P	L	S	S	P	L	Q	Q	Y	W	Q	T	V	V	E	R	L	P	E	P	L	A	E	E	S	L	S	A	Q	A	K	S	V	L	T	F	S	D	F	V	Q	D	S	V	I	A	H	P	E	W	L	T	E	L	E	S	Q	P	P	Q	A	D	E	W	Q	H	Y	A	A	W	L	Q	E	A	L	C	N	V
Template Known Secondary structure																		T	T			T	T			G	G	G																							T									S				G	G	G	G	G	G									T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	E	A	G	L	M	R	E	L	R	L	F	R	R	R	I	M	V	R	I	A	W	A	Q	T	L	A	L	V	T	E	E	S	I	L	Q	Q	L	S	Y	L	A	E	T	L	I	V	A	A	R	D	W	L	Y	D	A	C	C	R	E	W	G	T	P	C	N	A	Q	G	E	A	Q	P	L	L	I	L	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	E	A	G	L	X	R	E	L	R	L	F	R	R	R	I	X	V	R	I	A	W	A	Q	T	L	A	L	V	T	E	E	S	I	L	Q	Q	L	S	Y	L	A	E	T	L	I	V	A	A	R	D	W	L	Y	D	A	C	C	R	E	W	G	T	P	C	N	A	Q	G	E	A	Q	P	L	L	I	L	G	X
Template Known Secondary structure			S																										T	S	S																																T	T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	G	G	G	E	L	N	F	S	S	D	I	D	L	I	F	A	W	P	E	H	G	C	T	Q	G	G	R	R	E	L	D	N	A	Q	F	F	T	R	M	G	Q	R	L	I	K	V	L	D	Q	P	T	Q	D	G	F	V	Y	R	V	D	M	R	L	R	P	F	G	E	S	G	P	L	V	L	S	F	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		G	K	L	G	G	G	E	L	N	F	S	S	D	I	D	L	I	F	A	W	P	E	.	.	.	.	.	.	.	.	R	E	L	D	N	A	Q	F	F	T	R	X	G	Q	R	L	I	K	V	L	D	Q	P	T	Q	D	G	F	V	Y	R	V	D	X	R	L	R	P	F	G	E	S	G	P	L	V	L	S	F	A
Template Known Secondary structure						T	T				S	S												.	.	.	.	.	.	.	.			S																					B	T	T	B		S						T	T	S	T	T	G	G	G	S		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	D	Y	Y	Q	E	Q	G	R	D	W	E	R	Y	A	M	V	K	A	R	I	M	G	D	S	E	G	V	Y	A	N	E	L	R	A	M	L	R	P	F	V	F	R	R	Y	I	D	F	S	V	I	Q	S	L	R	N	M	K	G	M	I	A	R	E	V	R	R	R	G	L	T	D	N	I	K	L	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	E	D	Y	Y	Q	E	Q	G	R	D	W	E	R	Y	A	X	V	K	A	R	I	X	G	D	S	E	G	V	Y	A	N	E	L	R	A	X	L	R	P	F	V	F	R	R	Y	I	D	F	S	V	I	Q	S	L	R	N	X	K	G	X	I	A	R	E	V	R	R	R	G	L	T	D	N	I	K	L	G	A
Template Known Secondary structure																				T	T				S	S				S															S		S																										S			B	T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	R	E	I	E	F	I	V	Q	V	F	Q	L	I	R	G	G	R	E	P	S	L	Q	S	R	S	L	L	P	T	L	S	A	I	A	E	L	H	L	L	S	E	N	D	A	E	Q	L	R	V	A	Y	L	F	L	R	R	L	E	N	L	L	Q	S	I	N	D	E	Q	T	Q	T	L	P	S	D	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	I	R	E	I	E	F	I	V	Q	V	F	Q	L	I	R	G	G	R	E	P	S	L	Q	S	R	S	L	L	P	T	L	S	A	I	A	E	L	H	L	L	S	E	N	D	A	E	Q	L	R	V	A	Y	L	F	L	R	R	L	E	N	L	L	Q	S	I	N	D	E	Q	T	Q	T	L	P	S	D	E	L
Template Known Secondary structure		T	S																T	T	T		G	G	G			S	S											T	T	S	S																											T					B				S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	A	R	L	A	W	A	M	D	F	A	D	W	P	Q	L	T	G	A	L	T	A	H	M	T	N	V	R	R	V	F	N	E	L	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	A	R	L	A	W	A	X	D	F	A	D	W	P	Q	L	T	G	A	L	T	A	H	X	T	N	V	R	R	V	F	N	E	L	I	G
Template Known Secondary structure										T	T		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.