Job Description P30870 Confidence 11.83% Date Thu Jan 5 11:46:43 GMT 2012 Rank 80 Aligned Residues 203 % Identity 19% Template c1f7uA_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of the arginyl-trna synthetase complexed with the2 trna(arg) and l-arg Resolution 2.20 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		L	T	G	A	L	T	A	H	M	T	N	V	R	R	.	V	F	N	E	L	I	G	D	D	E	S	E	T	Q	E	E	S	L	S	E	Q	W	R	E	L	W	Q	D	A	L	Q	E	D	D	T	T	P	V	L	A	H	L	S	E	D	D	R	K	Q	V	L	T	L	I	A	D	F	R	K	E	L	D	K	R	T
Query Conservation																.
Alig confidence																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		L	T	R	D	V	G	A	A	M	D	R	Y	E	K	Y	H	F	D	K	M	I	Y	V	I	A	S	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	H	A	A	Q	F	F	E	I	L	K	Q	M	G	F	E	W	A	K	.	.	.	.	D	L	Q	H	V	N	F	G	M	V	Q	G	M
Template Known Secondary structure																			S								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		G	G	G	G	.	.	.	.	G											S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.
		496	.	.	.	500						.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure							.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	P	R	G	.	.	.	.	.	R	Q	V	L	D	H	L	M	P	H	L	L	S	D	V	C	A	R	E	D	A	A	V	T	L	S	R	I	T	A	L	L	V	G	I	V	T	R	T	T	Y	L	E	L	L	S	E	F	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	R	K	G	T	V	V	F	L	D	N	I	L	E	E	T	K	E	K	M	H	E	V	M	K	K	N	E	N	K	Y	A	Q	I	E	H	P	E	E	V	A	D	L	V	G	I	S	A	V	M	I	Q	D	M	Q	G	K	R	I	N	N	Y	E	F	K	W	E	R	M	L	S	F	E	G	D	T	G	P	Y
Template Known Secondary structure			G	G	G	T				B																		T						T	T		S																				S	S		T	T														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
					551	.	.	.	.	.	.	.	.	560	.	.																						.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query SS confidence		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query Sequence		.	.	.	A	L	K	H	L	I	S	L	C	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	I	A	S	Q	L	A	R	Y	P	L	L	L	D	E	L	L	D	P	N	T	L	Y	Q	P	T	A	T	D	A	Y	R	D	E	L	R	Q	Y	L	L	.	.	.
Query Conservation		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																								.	.	.
Template Conservation																																																					.	.	.
Template Sequence		L	Q	Y	A	H	S	R	L	R	S	V	E	R	N	A	S	G	I	T	Q	E	K	W	I	N	A	D	F	S	L	L	K	E	P	A	A	K	L	L	I	R	L	L	G	Q	Y	P	D	V	L	R	.	.	.	N	A	I	K	T	H	E	P	T	T	V	V	T	Y	L	F	K	L	T	H	Q	V	S	S	C	Y
Template Known Secondary structure																T	T	T	S						T	T	S		G	G	G			S											T	T							.	.	.
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
					604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	V	P	E	D	D	E	E	Q	Q	L	E	A	L	R	Q	F	K	Q	A	Q	L	L	R	I	A	A	A	D	I	A	G	T	L	P	V	M	K
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		D	V	L	W	V	A	G	Q	T	E	E	L	A	T	A	R	L	A	L	Y	G	A	A	R	Q	V	L	Y	N	G	M	R	L	L	G	L	T	P	V	E	R
Template Known Secondary structure						S	T	T	S																											T					S
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions