Job Description P0AG34 Confidence 0.97% Date Thu Jan 5 11:27:59 GMT 2012 Rank 92 Aligned Residues 164 % Identity 6% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	S	L	S	P	G	S	G	A	I	N	T	M	T	T	S	L	N	H	G	Y	R	G	A	V	A	S	I	A	G	L	Q	T	G	L	A	I	H	I	V	L	V	G	V	G	L	G	T	L	F	S	R	S	V	I	A	F	E	V	L	K	W	A	G	A	A	Y	L	I	W	L	G	I	Q	Q	W	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L
Template Known Secondary structure																				T	T		S	S	S					G	G	G																T	T			B
Template Predicted Secondary structure
Template SS confidence
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	I	D	L	K	S	L	A	S	T	Q	S	R	R	H	L	F	Q	R	A	V	F	V	N	L	T	N	P	K	S	I	V	F	L	A	A	L	F	P	Q	F	I	M	P	Q	Q	P	Q	L	M	Q	Y	I	V	L	G	V	T	T	I	V	V	D	I	I	V	M	I	G	Y	A	T	L	A	Q	R	I	A
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	.	.	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R
Template Known Secondary structure		T	T	S	S				T	T									T	T												.	.									T	T		S	S	S																				T	T	T	T	S	S	S	S	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		953	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.			.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030
		174	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	I	K	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	F	S	R	K
Template Known Secondary structure				T	S
Template Predicted Secondary structure
Template SS confidence
		1031	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions