Job Description P0AG34 Confidence 1.16% Date Thu Jan 5 11:27:59 GMT 2012 Rank 59 Aligned Residues 81 % Identity 12% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	V	A	S	I	A	G	L	Q	T	G	L	A	I	H	I	V	L	V	G	V	G	L	G	T	L	F	S	R	S	V	I	A	F	E	V	L	K	W	A	G	A	A	Y	L	I	W	L	G	I	Q	Q	W	R	A	A	G	A	I	D	L	K	S	L	A	S	T	Q	S	R	R	H	L	F	Q	R	A	V
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	.	.	.	.	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I
Template Known Secondary structure			S																						T	T					.	.	.	.							T																			S	S	T	T						T	T		S
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		117	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	N	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	I	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions