Job Description P0AG34 Confidence 0.99% Date Thu Jan 5 11:27:59 GMT 2012 Rank 84 Aligned Residues 189 % Identity 11% Template c2gfpA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:multidrug resistance protein d; PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli Resolution 3.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	W	W	F	A	Y	L	L	T	S	I	I	L	S	L	S	P	G	S	G	A	I	N	T	M	T	T	S	L	N	H	G	Y	R	G	A	V	A	S	I	A	G	L	Q	T	G	L	A	I	H	I	V	L	V	G	V	G	L	G	T	L	F	S	R	S	V	I	A	F	E	V	L	K	W	A	G	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	T	V	L	I	A	A	S	A	M	Q	G	M	G	T	G	V	G	G	V	M	A	R	T	L	P	R	D	L	Y	E	R	T	Q	L	R	H	A	N	S	L	L	N	M	G	I	L	V	S	P	L	L	A	P	L	I	G	G	L	L	D	T	M	W	N	W	R	A	C	Y	L	F	L	L	V	L	C	A	G
Template Known Secondary structure																																		T	S	S			S																							S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	I	W	L	G	I	Q	Q	W	R	A	A	G	A	I	D	L	K	S	L	A	S	T	Q	S	R	R	H	L	F	Q	R	A	V	F	V	N	L	T	N	P	K	S	I	V	F	L	A	A	L	F	P	Q	F	I	M	P	Q	Q	P	Q	L	M	Q	Y	I	V	L	G	V	T	T	I	V	V	D	I	I	V
Query Conservation
Alig confidence																																																									.	.	.
Template Conservation																																																									.	.	.
Template Sequence		V	T	F	S	M	A	R	W	M	P	E	T	R	P	V	D	A	P	R	T	R	L	L	T	S	Y	K	T	L	F	G	N	S	G	F	N	C	Y	L	L	M	L	I	G	G	L	A	G	I	A	A	F	E	A	C	.	.	.	S	G	V	L	M	G	A	V	L	G	L	S	S	M	T	V	S	I	L	F	I	L
Template Known Secondary structure									S	S				S	T	T	T						T	T	T		S	T																													.	.	.		S		S	S																	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	G	Y	A	T	L	A	Q	R	I	A	L	W	I	K	G	P	K	Q	M	K	A	L	N	K	I	F	G	S	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	P	A	A	F	F	G	A	W	F	A	G	R	P	N	K	R	F	S	T	L	M	W	Q	S	V	I	C	C	L	L
Template Known Secondary structure															T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions