 |
Job Description | P37007 | Confidence | 90.55% | Date | Thu Jan 5 11:54:19 GMT 2012 |
Rank | 246 | Aligned Residues | 45 |
% Identity | 16% | Template | d1sfxa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| TrmB-like
|
Resolution | 1.55 |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | M | S | L | R | T | E | F | V | L | F | A | S | Q | D | G | A | N | I | R | S | L | C | R | R | F | G | I | S | P | A | T | G | Y | K | W | L | Q | R | W | A | Q | E | G | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |
|   |
|   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
Template Sequence |   |
K | P | S | D | V | R | I | Y | S | L | L | L | E | R | G | G | X | R | V | S | E | I | A | R | E | L | D | L | S | A | R | F | V | R | D | R | L | K | V | L | L | K | R | G | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|