Return to main results Retrieve Phyre Job Id

Job DescriptionP37007
Confidence94.21%DateThu Jan 5 11:54:19 GMT 2012
Rank122Aligned Residues52
% Identity13%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20...... ...30......... 40.........50.........60.....
Predicted Secondary structure 
...




.









Query SS confidence 












. . .












.

























Query Sequence  SLRTEFVLFASQD. . . GANIRSLCRRFGI. SPATGYKWLQRWAQEGAAGLQDRPRI
Query Conservation    
   
      ...
 
   


  

.

 

 
 
 
    
   
      
Alig confidence 












...












.

























Template Conservation    

 

       
  





    
  
  

  

  

 

 
 
     
Template Sequence  QEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASR
Template Known Secondary structure  SS


TT
SSTTS
SSSSS
Template Predicted Secondary structure 



















Template SS confidence 























































   910.........20.........30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions