Job Description P37007 Confidence 99.48% Date Thu Jan 5 11:54:19 GMT 2012 Rank 15 Aligned Residues 133 % Identity 21% Template d1hyva_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.70

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	R	L	W	Q	M	D	F	K	G	H	F	P	F	G	G	G	R	C	H	P	L	T	L	L	D	D	H	S	R	F	S	L	C	L	A	H	C	T	D	E	R	R	E	T	V	Q	Q	Q	L	V	S	V	F	E	R	Y	G	L	P	D	R	M	T	M	D	N	G	S	P	W	G	D	T	T	G	T	W	T
Query Conservation
Alig confidence					.					.	.	.	.	.	.																									.																					.																			.	.
Template Conservation					.					.	.	.	.	.	.																									.																					.																			.	.
Template Sequence		P	G	I	.	W	Q	L	D	.	.	.	.	.	.	T	H	L	E	G	K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	.	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	W	P	.	V	K	T	V	H	T	D	N	G	S	N	F	T	S	T	T	V	K	.	.
Template Known Secondary structure		T	T		.					.	.	.	.	.	.				T	T									T	T	T									.	S	S																	S		.							S		G	G	G	G		S					.	.
Template Predicted Secondary structure					.					.	.	.	.	.	.																									.																					.																			.	.
Template SS confidence
		58	.	60		.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	L	W	L	M	R	L	G	I	R	V	G	H	S	R	P	Y	H	P	Q	T	Q	G	K	L	E	R	F	H	R	S	L	K	A	E	V	L	Q	G	K	W	F	A	D	S	G	E	L	Q	R	A	F	D	H	W	R	T	V	Y	N	L	E	R	P	H	E	A	L	D	M	A	V	P	G	S	R	Y	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																				.	.																			.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																				.	.																			.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	A	W	W	A	G	I	K	Q	E	F	G	Q	G	V	I	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	R	D	Q	A	E	.	.	H	L	K	T	A	V	Q	M	A	V	F	I	H	N	K	K	R	K	.	.	.	.	G	G	Y	S	A	G	E	R	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				T	T																										G	G	G	S	S	.	.	S																		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																				.	.																			.	.	.	.
Template SS confidence
													128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190
		301
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		202

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions