Job Description P37007 Confidence 99.28% Date Thu Jan 5 11:54:19 GMT 2012 Rank 18 Aligned Residues 108 % Identity 18% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	D	A	R	D	T	M	S	L	R	T	E	F	V	L	F	A	S	Q	D	G	A	N	I	R	S	L	C	R	R	F	G	I	S	P	A	T	G	Y	K	W	L	Q	R	W	A	Q	E	G	A	A	G	L	Q	D	R	P	R	I	P	H	H	S	P	N	R	S	S	D	D	I	T	A	L	L	R	M	A	H
Query Conservation
Alig confidence							.										.																																				.	.	.
Template Conservation							.										.																																				.	.	.
Template Sequence		N	G	R	P	L	.	P	D	S	T	R	Q	R	I	V	.	E	L	A	H	S	G	A	R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K	I	L	G	R	Y	Y	A	T	G	S	.	.	.	I	R	P	R	A	I	G	G	S	K	P	R	V	A	T	P	E	V	V	S	K	I	A	Q	Y	K
Template Known Secondary structure		T	T	S			.										.					T	T											T																	S		.	.	.		S					S					S	S	S
Template Predicted Secondary structure							.										.																																				.	.	.
Template SS confidence
		14	.	.	.	.		.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		D	R	H	E	R	W	G	A	R	K	I	K	R	W	L	E	D	Q	G	H	.	.	.	.	T	M	P	A	F	S	T	V	H	N	L	M	A
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.
Template Conservation
Template Sequence		Q	E	C	P	S	I	F	A	W	E	I	R	D	R	L	L	S	E	G	V	C	T	N	D	N	I	P	S	V	S	S	I	N	R	V	L	R
Template Known Secondary structure					T	T													T	T	S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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