Job Description P37007 Confidence 95.81% Date Thu Jan 5 11:54:19 GMT 2012 Rank 62 Aligned Residues 97 % Identity 15% Template c1iufA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:centromere abp1 protein; PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure									.	.																	.	.											.	.	.	.	.	.													.	.	.
Query SS confidence									.	.																	.	.											.	.	.	.	.	.													.	.	.
Query Sequence		M	P	W	D	A	R	D	.	.	T	M	S	L	R	T	E	F	V	L	F	A	S	Q	D	G	.	.	A	N	I	R	S	L	C	R	R	F	.	.	.	.	.	.	G	I	S	P	A	T	G	Y	K	W	L	Q	.	.	.	R	W	A	Q	E	G	A	A	G	L	Q	D	R	P	R	I	P	H	H	S	P	N
Query Conservation									.	.																	.	.											.	.	.	.	.	.													.	.	.
Alig confidence									.	.																	.	.											.	.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		M	G	K	I	K	R	R	A	I	T	E	H	E	K	R	A	L	R	H	Y	F	F	Q	L	Q	N	R	S	G	Q	Q	D	L	I	E	W	F	R	E	K	F	G	K	D	I	S	Q	P	S	V	S	Q	I	L	S	S	K	Y	S	Y	L	D	N	T	V	E	K	P	W	D	V	K	R	N	R	P	P	K	Y	P
Template Known Secondary structure						S	S	S				S												S	S	S	S																S	S			S	S	S	S	T	T										T	T	T	S		S	S	S	S	S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	S	D	D	I	T	A	L	L	R	M	A	H	D	R	H	E	R	W	G	A	R	K	I	K	R	W	L	E	D
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		L	L	E	A	A	L	F	E	W	Q	V	Q	.	Q	G	D	D	A	T	L	S	G	E	T	I	K	R	A	A	A	I
Template Known Secondary structure														.	T		T	T				S	S
Template Predicted Secondary structure														.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions