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Job DescriptionP77279
Confidence98.79%DateThu Jan 5 12:27:10 GMT 2012
Rank87Aligned Residues136
% Identity19%Templatec3thxB_
PDB info PDB header:dna binding protein/dnaChain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NSPLLQLQNVGYLA. . . . . . . GDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVA. . . . . . . . SLI. SPTSGTLLFE
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Template Sequence  EERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIV
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   844.....850.........860.........870.........880.........890.........900.........910.........920...
 
   68.70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  GEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRIS
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Template Sequence  DGIFTRM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STFMEELTD
Template Known Secondary structure  S
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   924.....930 .........
 
   148.150.... .....160.........170.........180....... ..190.........200...
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Query Sequence  LIRNLQF. . MPKVLLLDEITSALDESNKHNVNEMIHRYVREQ. NIAVLWVTHDKDEINH
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Template Sequence  TAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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