Return to main results Retrieve Phyre Job Id

Job DescriptionP77279
Confidence97.72%DateThu Jan 5 12:27:10 GMT 2012
Rank124Aligned Residues158
% Identity11%Templatec3bgwD_
PDB info PDB header:replicationChain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase
Resolution3.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  LRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRN
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Template Sequence  YKRRNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKK. . ENIKRLIVTAGSIN. . . . . . . AQKIKAARRDFA
Template Known Secondary structure  B
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   192.......200.........210.........220.........230...... ...240.........250 .........260..
 
   110.........120.........130.........140.........150.........160... ......170.........180..
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Query Sequence  RQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDE. . . . . . . ITSALDESNKHNVNEMIHR
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Template Sequence  SEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKK
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   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   183......190......
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Query Sequence  YVREQNIAVLWVTH
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Template Sequence  MARELDVVVIALSQ
Template Known Secondary structure  T
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   343......350......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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