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Job DescriptionP77279
Confidence97.46%DateThu Jan 5 12:27:10 GMT 2012
Rank140Aligned Residues125
% Identity12%Templatec2j7pA_
PDB info PDB header:signal recognitionChain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  RAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNR
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Template Sequence  KDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   96...100.........110.........120.........130.........140.
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  QPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMIHRYVREQNIA
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Template Sequence  . . . REQLRLLGEKVGVP. . . VLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVL
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   142.......150..... ....160.........170.........180.........190.........200.........210.....
 
   191....
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Query Sequence  VLWVT
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Template Sequence  LVLDA
Template Known Secondary structure  T
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   216...220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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